Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0826 |
Symbol | |
ID | 4460773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1023468 |
End bp | 1025012 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639701588 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_844958 |
Protein GI | 116748271 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.711821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGA ACGGGATGAA TCGTAGCATC AGGATGGCGG TGATCGGCGG AGGCAAGAAA TGCAGGGCCC TGCTCGAAAT GCTGGGTGCC GGCGTCTTCC CGTCTTTCAA CGCCGAAGTC GTGGCTGTCG CGGACCCCGA CGGCGACGCA GCCGGCATTG GACTGGCTAA GGAAAAAGGT ATCTTCACCA CCGCGGATTT TCGTGACCTC CGCAAGATAC CCGACCTCGA CCTGGTCGTT TGCCTCACCG GCGGCGAGGC TCCGCTGGAA GCTCTTCTGA AAAGACGCCG CCCAAGCGAA CGACTCCTTC ATGCCGTGAT TTCACGGCTG TTTGAGGATA TTCTTCGGGT TCGCCAGCAA TACCTGTTGA ACGAGCTTCA GCTCGACATC ACCGAAGGCA TCATCGAGAG CCTGTTCCTG AGCATGCGGG ACCACGTCCT GCTGCTTCGC CCCGATTTCA GGATTCTCGA TGTGAACGAG GCGTTCTGTC GTGCCTGCGG CACCGACAAG GACAGTCTGG TGGGGAAGGT GTGTCACGAA GTCATTCACG GATCCGGCGA GCGATGCGGG GGAGAGGGCT TCGTGTGCCC GCTGAAAATC TCCCTGCAAA CGGGAACCGT GGCTCACGCC GTTCACGAAC ACGTGGACGG GTCGGGGAAA CAGAGAGTTT GCGAAGTCAC GACGGTTCCG CTCAGAAAGG TGCATGGGAA GGTGGAGCTT GTCCTGGAGA TCGTCCGGGA CATTACGGAG GATCTCGAGA AGCGGGTGGA GGAAAAGACC CGGGCGCTCA AACGGGACCT GGCCCGGCTG GTTCACGAAG ACAAGATGAT TTCGCTGGGG AAACTGGTTG CCGGAGTGGT CCACGAAATC AACAACCCCC TGTCGGGCAT CAACGCTCTC GCGCGACTCG TCCACCAGGA ACTGGAGAGT TGCGACCTGG ATGAGGGGAG GAAGGAAAAG TTTCTTTACT ATCTTCACCT CATCGACACG GAATCCTCCC GGTGCAGCGA CATCGTCAAA GACCTCCTTT CCTTTTCGCG TTTGCGGGAA GTGGAACGGA AGCTCTTCCA GTTGAACGAC CTGGTGCACA AGGCGGTGCT CCTGAGCCGG CACAGGGGCG GCAATCAGGC CGTCCATTTC CAGCTTGAGC TGGCCGAGAC CCTGCCGGAG ATGATCGGGG ACCCCGGGCA GCTTTTGCAG TGCCTGTTGA ATCTCATTTT CAACGCCGTC GAGGCCATGC CCGACGGAGG AACGGTCAAG GTGGGCACGA GATTCGATTC GGCCACGAAC GAGATTCGCC TGGAGGTAAC GGATCAGGGC ATCGGTATTC CCGCTGATTT GACGTCGAAG GTCTTCGAGC CGTTTTTTTC CACCAAGAAC CGGGATAAGG GCGTCGGACT CGGCCTGTCC GTCGTCTACG GCATCGTCAA GGAGCACGGG GGAACGATTT ACGTGAGGAG TGAACTGCAA AAGGGAACCA GCTTTATCGT TCGGTTGCCT TTGCAATCCG GGAAAATCTG GAGGAACAAC CGGGAAAATG GCTGA
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Protein sequence | MAGNGMNRSI RMAVIGGGKK CRALLEMLGA GVFPSFNAEV VAVADPDGDA AGIGLAKEKG IFTTADFRDL RKIPDLDLVV CLTGGEAPLE ALLKRRRPSE RLLHAVISRL FEDILRVRQQ YLLNELQLDI TEGIIESLFL SMRDHVLLLR PDFRILDVNE AFCRACGTDK DSLVGKVCHE VIHGSGERCG GEGFVCPLKI SLQTGTVAHA VHEHVDGSGK QRVCEVTTVP LRKVHGKVEL VLEIVRDITE DLEKRVEEKT RALKRDLARL VHEDKMISLG KLVAGVVHEI NNPLSGINAL ARLVHQELES CDLDEGRKEK FLYYLHLIDT ESSRCSDIVK DLLSFSRLRE VERKLFQLND LVHKAVLLSR HRGGNQAVHF QLELAETLPE MIGDPGQLLQ CLLNLIFNAV EAMPDGGTVK VGTRFDSATN EIRLEVTDQG IGIPADLTSK VFEPFFSTKN RDKGVGLGLS VVYGIVKEHG GTIYVRSELQ KGTSFIVRLP LQSGKIWRNN RENG
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