| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0819 |
|---|
| Symbol | |
|---|
| ID | 4460766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1011962 |
|---|
| End bp | 1012846 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639701581 |
|---|
| Product | CoB--CoM heterodisulfide reductase |
|---|
| Protein accession | YP_844951 |
|---|
| Protein GI | 116748264 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2048] Heterodisulfide reductase, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.130606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACT TATACTACCC CGGCTGTTCA CTGGAAGGAA CCGCGTCCGA ATACGACGCC
TCGGTCAGGG CCGTGATGCA TTCACTTGGA GCGGAGCTGG CCGAGATCGA AGACTGGACA
TGCTGCGGCG CGAGCGCCGG GGATGCGATC AGCTATCTGC TGTCGCTGGC CCTGCCGGCG
AGGAACCTCG CCATCGCCGG AAAACAATCC CCCCGGTCGG ATGTCCTCGT ACCCTGCAAC
GCCTGTTATC TCAACTTGAA AAGAGTTGAC GACCACATGA ACCGCAGTAC GGATATTCGC
GAAAAAATCA ACGTGGTCCT GGCGGAAGAG AATCTTCGAT ACGGGGGAGG AATAAAGGTT
CGGCACCTCC TCGACGTGCT GGTCAGAGAC TTCGGGCCCG AGTCCATCGC GGCCAACGTG
AAGAATAAGC TCTCGGGCAT GAGAATCGTC CCGTATTACG GTTGCCAGTT CGCACGGCCC
TATTCCGACG CCGACGATCC CCAGTTTCCC GTTTCGATGG AACCCCTCAT CCGGGCTCTC
GGAGCCGAAG TCTACCCTTG GACGATGGGA GCGAAGTGCT GCGGGGCGGG ATTGATGACC
ACCAAGAGCG AGGTGGCTTT GAAACTCGTG GCGAACTTGC TCAATGGAGC AAGTGAAGCC
GATTGCATTC TCACCATCTG CCCGATGTGC CAGATGAATC TGGACAGCCA GCAGAACAAG
GCGTCACGTC TGCTCGGCAA AGATATGAGC AAGTCGGTCC TGTACGTCAC GCAACTCATG
GGGATTGCTT TCGGCCTCTC CGATGAGGAG CTGATGTTGA AGAAGAATCT TGCCGTGACG
GCGGGATTTC AAACGAAGCT CCGGTCGGCC TCATCCCGGG CATAG
|
|---|
| Protein sequence | MKYLYYPGCS LEGTASEYDA SVRAVMHSLG AELAEIEDWT CCGASAGDAI SYLLSLALPA
RNLAIAGKQS PRSDVLVPCN ACYLNLKRVD DHMNRSTDIR EKINVVLAEE NLRYGGGIKV
RHLLDVLVRD FGPESIAANV KNKLSGMRIV PYYGCQFARP YSDADDPQFP VSMEPLIRAL
GAEVYPWTMG AKCCGAGLMT TKSEVALKLV ANLLNGASEA DCILTICPMC QMNLDSQQNK
ASRLLGKDMS KSVLYVTQLM GIAFGLSDEE LMLKKNLAVT AGFQTKLRSA SSRA
|
|---|
| |