Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0815 |
Symbol | |
ID | 4460176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1008422 |
End bp | 1009162 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701577 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_844947 |
Protein GI | 116748260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.040259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0721562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACGA AATACTCTCT CATCATCCGC GTGCTCATCG TCCTGGGAAC GGGAGGCTGC CTGGTCTTCC TGTTCGGCCG GATCGAGTAT CCCTGGAACT GGAGGGTTCC ATGGGAATAC CGGTGGCTTT TCTTTCGCGG CTTCTACACC ACGTTCATTA TCGCCGTCGG GGCCACATCG ATGGGCTTCT GCCTCGGCGT CTTCGGGGGA ATCGCGCGGA CTTCCCGGTC GGTCCTGGCC AGGGAGACGG CGATGCTGTA CGTGGAGTTC TTTCGAGGCA CGCCTCTGCT GATTCAGATC TATATCTTCT ATTTCTGTGT GGCGGCGGCC GTACATTACG ACAATCCGGT GATCATCGGC ATGTTCTCTC TGGCCGTGTT TTCAGGCGCC TATATCACGG AGATGGTGAG AGCCGGGATT GAATCCATCG ACCGGGGTCA GATCGAGGCC GCCATGTCCA CCGGCTTGAA CGACTGGGAA ACCATGCGAT ACGTCGTCTT CCCTCAAGCC TTCCGGCGAA TCATTCCCCC CGTCGCAGGC CAGTTCGTCT CCGTTATCAA GGATTCGTCC CTGCTCTCGG TGATTTCCGT GCGCGAGCTG ACCAAGGCGT CGGAAATCAT CAACGCAACC ACCTACAAGA CTTTCGAGGC CTACTTGCCG CTGGCTGCGC TATACCTTAT CATTACGTAT CCGCTTTCCT ATCTGACCCA GCGCCTCGAA CAAAAAATCA AGCACGATTG A
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Protein sequence | MRTKYSLIIR VLIVLGTGGC LVFLFGRIEY PWNWRVPWEY RWLFFRGFYT TFIIAVGATS MGFCLGVFGG IARTSRSVLA RETAMLYVEF FRGTPLLIQI YIFYFCVAAA VHYDNPVIIG MFSLAVFSGA YITEMVRAGI ESIDRGQIEA AMSTGLNDWE TMRYVVFPQA FRRIIPPVAG QFVSVIKDSS LLSVISVREL TKASEIINAT TYKTFEAYLP LAALYLIITY PLSYLTQRLE QKIKHD
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