Gene Sfum_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0793 
Symbol 
ID4460446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp978991 
End bp979641 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content57% 
IMG OID639701555 
Productsugar transferase 
Protein accessionYP_844926 
Protein GI116748239 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.407437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAT CCGCAAATCG GACAATCAGC GAGGGGATGC AACGTTACTT GAGCATATCC 
GCTTTCGACA GGTTCTTGAA ACGAACGTTC GATGTCGTGG TATCGGCTGT CGGACTTACC
GCGCTCAGCT GGGTCATCCT GTTGAGCTAC GTGATCGCGT CAATCGATAC GGGAATGAAT
GGATTCTTCG TTCAGACCCG CATCGGGAAA CACGGCAGGC CGTTCCCGTT GATCAAGATC
CGGACCATGC GCCCGATCTG CGGACACGAC ACGGTGGTGA CGACGACCCA CGATCCGAGA
ATAACCAGAA TAGGCGGCTT GTTGCGCAAG ATGAAAGTCG ATGAGCTGCC CCAACTGTTC
AACGTACTGG TCGGCCATAT GAGCTTCGTC GGTCCCCGGC CGGACGTGCC CGGTTTCGCC
GATTGCCTCG AGGGGGATGA CCGGATCATT CTGTCCGTGC GACCTGGAAT CACGGGGCCG
GCCACGCTGC GTTTCCGAGA CGAGGAAAGG GAGCTCGCCG GACAGGCCGA TCCGGAAGAG
TACAACCGGG AAGTGATCTA CCCCGAAAAA GTGAGATTGA ACAAGCTGTA CGTGCGCAAT
TACAGTTTTA CGCAAGACAT CCGATACATC CTGGCCACGC TTTTCGGCTG A
 
Protein sequence
MRQSANRTIS EGMQRYLSIS AFDRFLKRTF DVVVSAVGLT ALSWVILLSY VIASIDTGMN 
GFFVQTRIGK HGRPFPLIKI RTMRPICGHD TVVTTTHDPR ITRIGGLLRK MKVDELPQLF
NVLVGHMSFV GPRPDVPGFA DCLEGDDRII LSVRPGITGP ATLRFRDEER ELAGQADPEE
YNREVIYPEK VRLNKLYVRN YSFTQDIRYI LATLFG