Gene Sfum_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0777 
Symbol 
ID4460808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp953351 
End bp954676 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID639701539 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_844910 
Protein GI116748223 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGC TGTCGCTCAA AAACCTTGAC GGACGAATGC AAGAGGTCGT CCGGGGTGCA 
TCGACGGCAT TTTTGATCAA GATCCTGGCA GCCGGCGTCG GATTCGCGTC CAACATCGTT
TTGGCCCGGT GCCTCGGAGC GGAAGGGGCC GGCCATTATT TCCTTGTCCT GACCGTAGTG
ACCGTCGCGG CGGTTTTCGG CCGCATGGGG CTGAACAATA CGATCCTGAG GTTCGCCTCG
GCGAACGTGT CCCAGGGCAA CTGGGAATCC GTCAAAGGGG TTTACGCCAA AGGGATCGGA
TTCGCGGTCG GTGCGTCCGG ACTGACGGGC ATCCTCATGT TTGTGTCCGC TCCCGTGGTG
GCCGAAAGGC TTTTCAACAA CCCCGAGCTC ACCGGCCTGC TCCGCTGGAT GTCACTGGCC
GCGATTCCCC TCGCGATTTC CGCTCTCTAT GCCCAGCTTC TCAGGGCGGT GGACAATATT
CGGGATGCGA TGATGGTTTT GAGCGCGTGG GTGCCTTTGT TCTTCACGGT CGGCACGGTC
GCGCTCGCGC CCTCTTTTGG CCCCCGCGGC GCGGTATGGG CCTACATTCT GGCGACGGTG
CTCACCACGC TGATCGCGAT GTGGGTCTGG CGACGCGAGA CACCCTGCCT GAGAGGAATA
AAAGGGCACT TCGAGACCGG GGAACTGCTC GCGAGCAGCA TTCCGCTTTT TTTCGCGTCC
TGCTGGCAAC TGATCATGCA ATGGTGCTCG AATTGCTTTC TGGGGGTATG GAGCACCTCC
GCCGACGTGG GCATCTTCGC GGTGGCGAAC CGCACGGCCA GCCTGACCAC GCTGATCCTG
GTCGCCGTGA ACAGCATTTC CGCTCCGAAA TTCGCCGCGC TTTACAGTCG CGGTGATCTT
TCGGGACTTG GACGCCTGGC GAGGGGTTCC GCCAAGATGA TGACGATCAT GAGCGTACCG
ATTATCATCC CCCTGGTGTT TGCTCCCGGG TTGGTGATGG GCCTGTTCGG CCCGCAATTT
GCCGGAGGGG GTACTTCGCT CGCGCTCCTG GCGCTCGGGC AGTTCGTGAA CGTGGCGACC
GGTTCGGTGA CTGCCGTGCT GATGATGTGC GGGTATGAAC GGGTGGCCAA CAACATCATG
GCTTTCAGTG CTTTGTGCTG CGTTGTCGCG AACCTGGCGC TCATCCCTTT CTGGGGCGTT
CTGGGAGCGG CTGCGGCGAC GGCAATCACT TTGATTGCGC AGAATCTTCT CGGCGTGGTA
ATGGTCTGGC GGCTGTTGGG AATCATGACC ATTCCGGGCC TTTTTTCGAA GAGGGCCCAA
CGATGA
 
Protein sequence
MALLSLKNLD GRMQEVVRGA STAFLIKILA AGVGFASNIV LARCLGAEGA GHYFLVLTVV 
TVAAVFGRMG LNNTILRFAS ANVSQGNWES VKGVYAKGIG FAVGASGLTG ILMFVSAPVV
AERLFNNPEL TGLLRWMSLA AIPLAISALY AQLLRAVDNI RDAMMVLSAW VPLFFTVGTV
ALAPSFGPRG AVWAYILATV LTTLIAMWVW RRETPCLRGI KGHFETGELL ASSIPLFFAS
CWQLIMQWCS NCFLGVWSTS ADVGIFAVAN RTASLTTLIL VAVNSISAPK FAALYSRGDL
SGLGRLARGS AKMMTIMSVP IIIPLVFAPG LVMGLFGPQF AGGGTSLALL ALGQFVNVAT
GSVTAVLMMC GYERVANNIM AFSALCCVVA NLALIPFWGV LGAAAATAIT LIAQNLLGVV
MVWRLLGIMT IPGLFSKRAQ R