Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0755 |
Symbol | |
ID | 4461691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 924298 |
End bp | 925671 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701517 |
Product | TolB domain-containing protein |
Protein accession | YP_844888 |
Protein GI | 116748201 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.242927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCA GAAAAGGATC GTTTCAAGCC ATGTTCTGTT GGAGACATTG TCGGCCATGG TTGCGCCTGC TCCTTATTCT GCCCGTTTTG GCGGTGGGTA TGAGCCGATT GGCGCACGCA CAAGCCCAAC GCTTCGAATT GGATCTCACC AACCCCAACT TTCAGAGAAT CGCCATCGCG ATTCCCGATT TCAAACGCCA GTCCTCGGAG CAAACGCAAC TCGCCCGCGA GATGGGCGAA ACCCTCGCGG GCGATCTCGA TTTCTCGGGA ATCTTCCGCC CCCTCGATCC CAAAGGGTTC CTGGAGGATC CGCAGACCAT GGGATTGAAT GCTCCGGAGA TCAAGTTCCC GGACTGGAGG CGGCTCGGCG CGGATTACAT GGTGCGCGGG AACTACCTGG TTCAGGGCGG AACGGTCAAG ATTGAGGCCC GCCTTTTCGA TGTGGCCGCA GGTCGGCCGG TCATCGCCAA GGCCTACGAG GGGGACGTCA GGGGATGGCG CGCAATGATC CACCGCTTTG CCGATGAAAT CCTTTATGCC CTGACGGGCG AAAGAGGGGT TTTCGACACG AAGATCGCCT ATGTCCAGAG CATGGGGAAG AACAAGGAAA TTTTCATCTC GGATTTTGAC GGGAGCAATC CGGTTCAGGC CTCTCGCGAC AACTCGCTGA GCCTGTCGCC CGCCTGGAAC CCGCAGATGA GCCAGATCGC CTACGTCAGC TACCGCGACG GCAATGCCAA GATTTACCTG CTGAATCTGC AGGACGGATC GAGCCGCCTG TTATGCGGTT ATCCCGGCAT GAACATTTCG CCGGCCTGGC GTCCGGGCAG GCCCGAATTG GCCGTGACCC TGACCAGGGA CGGCAATCCC GACATTTTCC TGGTGTCCGC CTCTTCAGGC CAGATTCTCC AGAAGCTGGT ACAGGGGCGT TCGATCAATG TATCCCCGGA TTGGTCGCCG GACGGCAGAA GCCTGGCTTT CGTTTCCGAT GAGTCGGGAA ATCCCCAGAT CTACGCGATC GATGTGGGGA GCGGCCAGAA AAGAAGACTG ACGTTCAGTG GAACCTACAA CACCTCGCCG AGCTGGTCGC CCAAGGGAGA CTTTATCGCC TACAGCGGCA CGGTGGGAGG CAGGCACCAC ATTTTCATCA TGAAGACCGA CGGCAGCGGC AATCGCCAGT TGACCGACGG CGACGGAGAC GATGTTTCGC CGACGTGGTC CCCGGACGGA CGCATGATTG CGTTCAGCTC AACCAGGCAG GGCGGTTCGG CCATCTGGGT CTCATCAGTG AATGGAATCG GCGTCAGGCG GCTCACTCGA CAGGGGGGAG GACAGGAGTT GCCCGACTGG TCGCCCCGCA TGAGTGGGCG CTGA
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Protein sequence | MIFRKGSFQA MFCWRHCRPW LRLLLILPVL AVGMSRLAHA QAQRFELDLT NPNFQRIAIA IPDFKRQSSE QTQLAREMGE TLAGDLDFSG IFRPLDPKGF LEDPQTMGLN APEIKFPDWR RLGADYMVRG NYLVQGGTVK IEARLFDVAA GRPVIAKAYE GDVRGWRAMI HRFADEILYA LTGERGVFDT KIAYVQSMGK NKEIFISDFD GSNPVQASRD NSLSLSPAWN PQMSQIAYVS YRDGNAKIYL LNLQDGSSRL LCGYPGMNIS PAWRPGRPEL AVTLTRDGNP DIFLVSASSG QILQKLVQGR SINVSPDWSP DGRSLAFVSD ESGNPQIYAI DVGSGQKRRL TFSGTYNTSP SWSPKGDFIA YSGTVGGRHH IFIMKTDGSG NRQLTDGDGD DVSPTWSPDG RMIAFSSTRQ GGSAIWVSSV NGIGVRRLTR QGGGQELPDW SPRMSGR
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