Gene Sfum_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0738 
Symbol 
ID4460821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp903433 
End bp904710 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID639701500 
ProductDNA-directed DNA polymerase 
Protein accessionYP_844871 
Protein GI116748184 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.59258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GGGAATTTTC GTCTTTTCGC GCGGAAGGGG TCGCGGCGGG ACGCCGCCGC 
GCGAAAGAGG GGGAACGGCA GGATTGGAGC GTGAACGTGG CGCGCCGCAT CATGCACGTG
GACATGGATG CGTTCTATGC CTCGGTGGAA CAGGCGGATC GACCCGAGTT TAAGGGAAAA
CCCGTGATTG TCGGGGGGGC GAGACGGGGA GTGGTGTCCG CGGCATCGTA TGAAGCCCGC
AGGTTCGGCG TCCATTCGGC CATGCCCGTG TTTCAGGCGA AGCGACTGTG CCCGGGGGGG
ATATTCCTGC CCGTGCGCAT GGGCAGATAC AAGGAAGTCT CAAAAGTGGT GATGGACATC
CTCTGCGGTA TTTCTCCCCT TGTGGAGCAG ATTTCCATCG ATGAGGCGTT CGTGGACATC
ACCGGCACCG AAGCGCTTCA CGGTTCGCCC GAGTCGCTGG GCCGCCGGGT GAAGAGTCAA
ATCCGCGCGG CGACACGGGT GACCTGCTCC GTTGGAATCG CGCCGGGCAA GTTCGTTGCC
AAAATCGCAT CCGACATCCA CAAGCCCGAC GGGTTGACCA TCGTGGAAGA CGACCGGGTA
GAGGCATTTC TTGCCCCGCT GCCCGTCGAA AGGATTCCGG GAATCGGGAA GAAGACTTCC
GAAGCGTTGA GAAGTCTCGG CGTTCGCGCC ATAGGGGATG TACTGAGGTT TCCCGCGTCG
TTTTGGGTGA AGCGGCTGGG CGCCTGGGGG GTGAAGCTCC ATGAAAGGGC GCGGGGGGTT
GATCCCGCTC CCGTCATTGC TTACTCGCAG GCGAAATCGT GCAGCGCGGA AGACACGTTC
CCCGAAGACG TCGACGATGT GGAAACCCTG GAGAAATGGC TGTTTGTGCA GTCGGAAGAG
GTGGGCAAGG AACTGCGCCG GGAGTCGTTC CGGGGCAGGA CCGTGACCCT CAAGGTGAAA
TTCGCGGATT TCAGCTCCAT CACCAGGAGT CATACGCTGC GCGAAGCCAC CGATTGCACC
CAGTTGATTT TCGGCACTGC TTCGCGCCTG CTCCGGGCGC TCAAGCTCAA TCGCAAGGTC
AGGCTCGTGG GCGTGGGGGT GTCCAACCTC TCCGCGATGC CCGAGCAGAA GCCGGTGTTT
TCGGACTCCA TGCTCGTGCG GCAGAGGAAG CTGGATCGGG CAATGGATCG AATCCACGAA
CGCTTCGGCC ACGGGGCGCT GAGGAGGGGA AGGGTCCTCG GGTTCGAGAG CCCGGCGGAT
GAGGAGGGAG ACCCTTGA
 
Protein sequence
MSQREFSSFR AEGVAAGRRR AKEGERQDWS VNVARRIMHV DMDAFYASVE QADRPEFKGK 
PVIVGGARRG VVSAASYEAR RFGVHSAMPV FQAKRLCPGG IFLPVRMGRY KEVSKVVMDI
LCGISPLVEQ ISIDEAFVDI TGTEALHGSP ESLGRRVKSQ IRAATRVTCS VGIAPGKFVA
KIASDIHKPD GLTIVEDDRV EAFLAPLPVE RIPGIGKKTS EALRSLGVRA IGDVLRFPAS
FWVKRLGAWG VKLHERARGV DPAPVIAYSQ AKSCSAEDTF PEDVDDVETL EKWLFVQSEE
VGKELRRESF RGRTVTLKVK FADFSSITRS HTLREATDCT QLIFGTASRL LRALKLNRKV
RLVGVGVSNL SAMPEQKPVF SDSMLVRQRK LDRAMDRIHE RFGHGALRRG RVLGFESPAD
EEGDP