Gene Sfum_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0725 
Symbol 
ID4460791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp881734 
End bp882579 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID639701487 
Productputative undecaprenol kinase 
Protein accessionYP_844858 
Protein GI116748171 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.60596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGT TGCAGGGATT GTTGCTGGGA TTGATCCAGG GGCTGACGGA GTTCCTTCCG 
ATCAGCAGCA CGGCGCATCT GACCCTTGCC GGAAAATGGA TGGGGGTCGT CTCGGCCGAA
CATCCCGAAC ACTGGACAGC CTTCATAGCG GTCATCCAAT TGGGCACGAT GGCCGCCGTG
CTGATCTATT TCGCCAGGGA CGTCCTGGAC ATCTCCCTTA CCTTTCTGGA AGAAAACGTA
TTCCGACGCA TGCGGTTCAA AGATCAATCT CACGTTTCCA AGCTGGGCTG GTACGTGATT
CTGGGTTCCC TGCCGGTGGC GACATTCGGT CTCGTTTTCA AGAAGGTCAT CGAGGGGAGC
CTGACCAAGA GCCTCATCGT GATCTCGGCG AGCCTGATCG TCTTCGGCAT CCTGCTCGGC
GTTTCAGAGG TGGTCGCACG GTTTTCCAAG AGCATCAAGC GGATTTCCTG GCTGGACGCC
CTGGTGGTCG GTTTCGCCCA GGTCATGGCC TTGGTTCCGG GCGCGTCCCG ATCCGGAACG
ACGATAACCG CCGGCCTCTT CATGGGGATG ACACGCGAAA CCGCGGCGCG GTTCTCCTTT
CTACTGAGCA TACCGGCGGT GATGGCGAGC GGGTTGCTGG AGTTCAGGGA AAGCCTCGAC
TTCATGGGTT CGCAGGACTT TCTGGTTCTT GCCTCGGCAA CACTGATGTC CGCCGTGAGC
GGATACCTCA CCATCGCTTT TCTGCTTCGA TTCCTTCGTC GCCACTCCAC GAACGTTTTC
GTGGTCTACC GGGTGGTTTT GGGCGGCGCA CTCTTGTGGA TGGTCTTCCG GCACGGCGTC
GTATGA
 
Protein sequence
MNVLQGLLLG LIQGLTEFLP ISSTAHLTLA GKWMGVVSAE HPEHWTAFIA VIQLGTMAAV 
LIYFARDVLD ISLTFLEENV FRRMRFKDQS HVSKLGWYVI LGSLPVATFG LVFKKVIEGS
LTKSLIVISA SLIVFGILLG VSEVVARFSK SIKRISWLDA LVVGFAQVMA LVPGASRSGT
TITAGLFMGM TRETAARFSF LLSIPAVMAS GLLEFRESLD FMGSQDFLVL ASATLMSAVS
GYLTIAFLLR FLRRHSTNVF VVYRVVLGGA LLWMVFRHGV V