Gene Sfum_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0723 
Symbollnt 
ID4460789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp878961 
End bp880493 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content61% 
IMG OID639701485 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_844856 
Protein GI116748169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA ACAAGCTGTT TTTGAGTGTC CCGCTGAGCG TTCTGAGTGG CGTGCTGCTG 
ACCGTGGGCC TGCCGAAGCT CGAGCTCTTT TACTGTTCAT GGGTGGCCTT GATTCCGCTG
TTTGCGGCCA TTCGCGGGAA GACCGTGAAG CAGGCCCTTT GGCTGGGCTA CCTTTGCGGA
ATCGTGCACT TTGCATCCAT GCTCTACTGG ATCTGGTACG TCATCGACTA CTACGGCGGT
CTGCCGTTCG CCGTGGCGGT CCTCATTCTG CTGCTCCTGA GTGCCTACCT GGCGGTCTAC
GTGGCGGTGT TCAGCGCGCT CGCGCGAAAA TGGGAATCCA ACTTTTTTTT CTGGCTGTTT
GGATTGCCTT CGGCATGGGT GACCCTCGAG CTCATACGTG CCTATGCGGT TTCGGGTTTC
CCCTGGGGGA ACCTTGGGTA TACCCAGGCC CCGCTGGCTT CGCTCATCCA GGTGGCGGAC
ATCACGGGCG TGTACGGGGT CAGCTGGCTG GTCGTGCTCG GCAATACCGC CATAGCCGCC
TTCCTCTACC GGTTTCACAT GAAGACCGCC GTTATCGCCC TGGCTGTGTG TGTGGCGGGT
GCGACAGCCT ATGGCGCGTG GCGCGTGGAG GTGGTCAAAG GACTGCAGAG CCTGGCTGCT
CCGTTCACGG TGGGCGTGGT CCAGGGGAAC ATCGATCAAA GCAAGAAATG GGATCCCGCG
TTTCAGCAGG AGACGCTGAG ACGTTACCAG CGGCTGTCCA TGGAGGCTTC GGTGCGTGTT
CCCGCGCCCG AGTTGCTGGT GTGGCCCGAG ACGGCTGCAC CCTTTTTCTA CGGAATCGAT
GACAAGCTGA CGCCGCAACT CAACGAGCTC GTCCGACAGG CGGGTATTCC CCTGTTGTTC
GGCAGTCCCG GCGCGATCCG GGCGGACGGT GAAATCCGGT TGCTCAACAA GGCCTACCTG
GTGGACGGCA GGGCCGAGCT CAAGGGAACT TACGCCAAGC AGCACCTGGT GCCTTTCGGT
GAGTACGTGC CGTATGCCCG CGTGCTGTTC TTCGTGCATC GCCTGGTTCA TGCCGCGGGG
GATTTCATGG CCGGTAAGGA TCCCGATCCG CTTCGGCTGG ATGAGCGGCC GCTGGGCGTG
CTGATCTGCT ACGAGGGGAT TTTCCCGGAG CTTTCACGGG CCACGGTCCG GGCCGGGGCC
ACGGCCCTGG TCAATATCAC CAACGATGCA TGGTACGGGA ACACCAGCGC CCCGTATCAA
CACCTGGAAA TGGCCCGCTG GCGCGCGATC GAATGTCGGG TGCCCATGAT CCGCGCGGCG
AACACGGGAA TCAGCGCGAT CTACGATGCG ACGGGAACCC CGTGCGGCTT GATTCCGTTG
GGTCAGGAAG GTTATCTTGT CTGTAGCGTG CGGCCGTTCC GGCTGGTGAC CTTCTACACC
AGGTTCGGCG ATATTTTTGC GTGGCTGTGC GTTTTGATCA CGCTTTCAGG AATCATCTAT
TCGACGTTTC AACGCCGTGT GGCGTTCAAG TGA
 
Protein sequence
MSSNKLFLSV PLSVLSGVLL TVGLPKLELF YCSWVALIPL FAAIRGKTVK QALWLGYLCG 
IVHFASMLYW IWYVIDYYGG LPFAVAVLIL LLLSAYLAVY VAVFSALARK WESNFFFWLF
GLPSAWVTLE LIRAYAVSGF PWGNLGYTQA PLASLIQVAD ITGVYGVSWL VVLGNTAIAA
FLYRFHMKTA VIALAVCVAG ATAYGAWRVE VVKGLQSLAA PFTVGVVQGN IDQSKKWDPA
FQQETLRRYQ RLSMEASVRV PAPELLVWPE TAAPFFYGID DKLTPQLNEL VRQAGIPLLF
GSPGAIRADG EIRLLNKAYL VDGRAELKGT YAKQHLVPFG EYVPYARVLF FVHRLVHAAG
DFMAGKDPDP LRLDERPLGV LICYEGIFPE LSRATVRAGA TALVNITNDA WYGNTSAPYQ
HLEMARWRAI ECRVPMIRAA NTGISAIYDA TGTPCGLIPL GQEGYLVCSV RPFRLVTFYT
RFGDIFAWLC VLITLSGIIY STFQRRVAFK