| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0711 |
|---|
| Symbol | |
|---|
| ID | 4461273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 865418 |
|---|
| End bp | 866800 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639701473 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_844844 |
|---|
| Protein GI | 116748157 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.62516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA ATGTCTGTCT TGGCAAGGAA GTGGAACCTC CGAACGAAGA AACGGAACCT
CCCGGTAGAG TTGTCCAACT CTCCATTTTT CCCACGATAG GCCTCACGGA TAACAGGTCA
CGCACACAAC CTCTCGGACC CCGCCGCCGG AACCGCCGGT CGGAATCCAG ATTCCCGAAC
GAGAATGCCG CATTCAGCAT CAATCCCCGA GCCGATGCTT TTCGGAGGAC GCATTTCCCT
CGTGTGTCGA CTGCGGAATG GAACGATTGG CGCTGGCAGC TCAGGAATCG GATCCAGGAC
CGGGAGGCTC TGGCGCGGAT CATCCGTCTG TCCGACGATG AGCTGAAAGC CGTGACGTCC
GGGCGGGGAC CGTTGCCCGT CGCCATCACA CCGTACTATG CCAGTTTGCT GGACTGCAAC
GATCCGTCGC AACCCGTGCG GCGTTGCGTG GTGCCGGTGG ATCGTGAGTA CTTTCATCAT
CCGTGCGAAA CCGAGGATCC TCTTGGAGAG GAAAAAGACA GCCAGCTGCC CAACCTGGTC
CACCGCTATC CGGATCGGGT CCTCTTTCTG GTGACAGGGT ACTGCTCGAC CTATTGCCGC
TATTGCACCC GCTCGCGCAT GGTGGGCAAC CGGGGCACCT ACCGTTTTGG CCATCGCGAA
TGGGACAGGG CCATCGAATA CATCGAGCGG ACCCCCACCA TCCGTGATGT TCTGCTGTCG
GGTGGAGACC CGCTGACCCT TCCCAACGAC CATCTGAAGT GGCTGCTGTC GCGTCTGCGG
CGCATTCCCC ACGTGGAATT TCTGCGCATC GGGACGAAAG TGCCGGTGGT CCTTCCTCAG
CGCGTCACCA TGGGACTGGT GCGCATGTTG AAGCAGTACC ATCCCCTGTG GATGAGCATC
CACTTTACAC ACCCCGACGA ATTGACGCCC GAGACGGCTC ACGCCTGCAC CCGTCTCGCC
GATGCGGGGA TCCCGCTGGG GAGCCAGACC GTATTGTTGT CCGGCGTCAA CGACAACGTC
GAAACCATGA CGAGGTTGTT CCACGGCCTG CTGAAAATAC GGGTCAAACC TTATTACCTG
TATCAATGCG ACCCGATTCC GGGTTCATCG CATTTCCGGA CTCCGGTGAG TAAAGGTCTG
GAAATCATTC GGGGACTGAG GGGATTCACT TCGGGATACG CCGTTCCCAC ATATGTGATC
GACGCACCGG GGGGCGGCGG CAAGGTTCCG TTGCTTCCGG AGTACGTTGC CGGTCGCGAC
GGCGACGATC TCCTGCTTCG CAACTACGCC GGCGATCTCT ACCGGTATCC CGACCCGGCG
GGAAACACCG GCGAAAGTGC GGGGAGCGGA TTTCGGATGT GTTCGGGACC ATTGAAGGAA
TAG
|
|---|
| Protein sequence | MEDNVCLGKE VEPPNEETEP PGRVVQLSIF PTIGLTDNRS RTQPLGPRRR NRRSESRFPN
ENAAFSINPR ADAFRRTHFP RVSTAEWNDW RWQLRNRIQD REALARIIRL SDDELKAVTS
GRGPLPVAIT PYYASLLDCN DPSQPVRRCV VPVDREYFHH PCETEDPLGE EKDSQLPNLV
HRYPDRVLFL VTGYCSTYCR YCTRSRMVGN RGTYRFGHRE WDRAIEYIER TPTIRDVLLS
GGDPLTLPND HLKWLLSRLR RIPHVEFLRI GTKVPVVLPQ RVTMGLVRML KQYHPLWMSI
HFTHPDELTP ETAHACTRLA DAGIPLGSQT VLLSGVNDNV ETMTRLFHGL LKIRVKPYYL
YQCDPIPGSS HFRTPVSKGL EIIRGLRGFT SGYAVPTYVI DAPGGGGKVP LLPEYVAGRD
GDDLLLRNYA GDLYRYPDPA GNTGESAGSG FRMCSGPLKE
|
|---|
| |