| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0683 |
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| Symbol | |
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| ID | 4460185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 829321 |
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| End bp | 830073 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701440 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_844817 |
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| Protein GI | 116748130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.316582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0629739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAG TGAGGCTGCA GAAAGTGCTC GCTCAGGCAG GCATTGCCTC CAGGCGCGGT
GCCGAGGAGG TGATCCGGCA GGGGCGGGTC GTCGTGAACG GGATCGTGGT CACGGAGCTC
GGGGTCAAGG TTGACCCGCA TGCGGATCGG ATCACGGTGG ACCGGGTCAC GATCGCCATG
GTCGAATCGA GGGTGTATCT GCTCCTCTTC AAGCCGAGGT GCTGTGTCAC AACGGCCCGC
GATCCACAGG GGCGCAAGAC GGTGTTCGAT TTCGTTCCCG ACGCGGGCGC GCGCCTGTTC
CCGGTGGGAC GCCTGGATTT CGACGCGGAG GGACTTCTCC TGCTCACCAA CGACGGCCTA
CTGGCGAACC GGCTGCAGCA TCCCCGCTAT GGAGTGACCA AGACTTACGA AGTGGCGGCC
ATGGGACATC CGACCCCGGC GGCGCTCGAC CGGCTGCGTA CCGGGGTGAT GTTAGAAGAG
GGCATGACGG CGCCGGCGGA GGTCACGGTG ATCGGATCGT CTCCCCGGAG CACCCGGTTG
AGAATCGTCC TCCATCAGGG CTGGAATCGT CAGATCAAGC GCATGGGGGA GGCGGTCGGC
CATCCGGTGC TGAGCATCAA AAGGGTGGCT TTCGGACCCC TCAAGCTCGG CAGCCTGAAA
CCCGGCGGTT CCAGGCATCT GAAATCCGGG GAGGTTGAAC TCCTGTACAA ACTGGTGCAT
CTGGACAAGG AGCAACGCAA CGCAGATGGG TAG
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| Protein sequence | MTKVRLQKVL AQAGIASRRG AEEVIRQGRV VVNGIVVTEL GVKVDPHADR ITVDRVTIAM
VESRVYLLLF KPRCCVTTAR DPQGRKTVFD FVPDAGARLF PVGRLDFDAE GLLLLTNDGL
LANRLQHPRY GVTKTYEVAA MGHPTPAALD RLRTGVMLEE GMTAPAEVTV IGSSPRSTRL
RIVLHQGWNR QIKRMGEAVG HPVLSIKRVA FGPLKLGSLK PGGSRHLKSG EVELLYKLVH
LDKEQRNADG
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