| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0680 |
|---|
| Symbol | |
|---|
| ID | 4460182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 826585 |
|---|
| End bp | 827061 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639701437 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_844814 |
|---|
| Protein GI | 116748127 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0131735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0545713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC CCACCAAGAG CGAGTACTAC ACCGAGATCG CTCTGTCCGT GGCGCAGCGC
AGCACGTGCC TGCGGCGTCG CTTCGGGGCG GTTATCGTCA AGAGCGATCA GATCATCAGC
ACAGGCTACA ACGGTGCGCC GCGAAAGACG GCGAACTGTA TCGACCTCGG CTATTGCGCG
CGCAAGCAAC TGAGCATCCC CGCGGGGCAG AATTACGAAC TGTGTCGCGC CGTGCACGCG
GAAATGAACG CGGTCATTCA CGCGTCGAGA CTGGACATGG TGGGAGCCGA TCTCTATCTG
GCGGGACTCG ACGTTGAGAC CGGCAACCAG GTGATCCACC CGGAACCCTG CCTGCTGTGC
CGTCGGGTAA TCATCAACGC GGGCATCCAG CGCGTGGTGG TTCCCGCGGA ATCGGAAGGA
TTCCATTACA TCGACGTCGA CGACTGGATC CTTCAGGACC GCGTCTCCTT CAAGTAG
|
|---|
| Protein sequence | MNRPTKSEYY TEIALSVAQR STCLRRRFGA VIVKSDQIIS TGYNGAPRKT ANCIDLGYCA
RKQLSIPAGQ NYELCRAVHA EMNAVIHASR LDMVGADLYL AGLDVETGNQ VIHPEPCLLC
RRVIINAGIQ RVVVPAESEG FHYIDVDDWI LQDRVSFK
|
|---|
| |