Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0679 |
Symbol | |
ID | 4460181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 823883 |
End bp | 826549 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701436 |
Product | polynucleotide adenylyltransferase region |
Protein accession | YP_844813 |
Protein GI | 116748126 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase [COG0618] Exopolyphosphatase-related proteins [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.197003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0338911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTGA TCACCACTCA TATCAATGCC GATTTCGACG CGATGGCTTC CATGATCGCC GCCAAAAAGC TGTATCCGGA CGCGGTGCTG GTCTTTCCCG GTTCGCAGGA GAAGACGCTT CGCGAGTATT TCATCAACTC CACGGTCTAC ATCTACGGCT TCAAGCGGCT CCGGGATCTG GACCTGGACC GGGTCAGCAG GCTCATCCTG GTGGATACCC GGCAGATTTC GCGGATCGGC AGGTTCGTGG AAATTCTCGA TCGTCCGGGG ATGGACATCC ACGTCTACGA TCACCATCCG GACGCCGAGG ACGATATCCA AGGCGTCTTC AACCTGATCA AGCCGGTGGG GGCCACGGTC ACGATCCTGA CGCAGCTCAT CCGGGAGCGC GGGTTGGAGG TGACTCCGGA GGAGGCAACC ATCATGAGCC TCGGGCTCTT TGAGGACACC GGTTCCTTCA CCTTCAACAA CACGACCCCC GAGGACTTCG AAGCCGCGGC ATTCCTGCTG CGCAGCGGAG CCGATCTGAA CGCCGTATCG GACATGGTCA CCCAGGAACT GACGGCCGAG CAGGTCGGCC TCCTCAACGA GCTGATCACC TCGGCCAAAA CCTACGGCAT CGCGGGCATC GACGTCTGCA TCGCCACGGT CTCCGTCGAG AAGTACGTCG GGGATTTCGC CGTGCTGGTG CACAAGCTCA AGGACATTGA AAATCTGGAC GTCGTCTTCG CCCTGGCCCG GATGGACGAC CGCGTCTACC TGGTGGGGCG CAGCCGCATT CCCGAAATCA ACGTCAGCAC CGTGGCGGCC TACTTTGGAG GCGGCGGGCA CGCGACGGCG GCTTCCGCGA GCATCAAGGA CCTCACGCTT TTCCAGGTGG AAAACAAGCT GCTCGAATTC CTCAGAAGCT ACATTCATCC CTATCCGACG GCGGAGAGCA TGATGACCAG CCCGGTGATT TTCACGGAGC CCGAGGTGAC CGTGGCCGAA GCCGGGCAGA GCATGATCCG CTACAACATC AATTCGATGC CGGTCATGGA GGATGGGCGG ATCGTGGGCC TGACCACGCG CCAGGTCCTG GAGAAGGCCA TATTTCACGG GCTGGAAAAG CGGGCGGTAC GGGAGTTCAT GACCACCGAC TTCAGCACCG TCGGTCCCAA CGCCACGCTG CTCGAGATTG AAAGCTACCT GGTCGAACGC CATCAAAGGA TCGTGCCGGT GATGGAGGAC AACCGGGTGA TCGGAGTCAT CACCCGCCGA GACCTGCTGA AATTCCTGGT TGAAGACCAG ACCACCAACG CCCGGTCGCT CTACGGGGAT ACGAACCTTG CCGCCTGGTC CAAACGCAAG AACGTGGTTG CGGTGATAAT GGAGCAATTG CCCCGTGAAA TTGTCCAGAC ACTCAAGGAT TTCGGGAAGC TCGCGAAGGA CCTGGGGATG AAGGCCTATG CGGTGGGGGG GTTCGTGCGG GACCTCCTGC TCCGGCGTTC CAACCTGGAC ATAGACATCG TGGTTGAAGG GGACGGCATC GAATTCGCCA GGACATACGC CAGGGAACAC GGCATCCGCT GCCGGTTCCA CAAGAAGTTC AATACCGCCG TGCTCATTTT TCCCGATGAC CGCAGAGTGG ACGTGGCTTC GGCGCGTTTC GAGTATTATC AGTATCCGGC TGCCCTGCCG ATTGTGGAAT TCAGCTCCCT GAAAATGGAC CTGTACCGGC GGGATTTCAC GATCAACACC CTGGCGCTTG CGCTCAACCC CGGAGAATTC GGCCAACTGA TCGATTTCTT CGGCGGACAG CGCGACCTGA AGGACAAGAC CATTCGGGTC CTTCACAACC TGAGCCTTGT GGAGGACCCG ACACGGATTC TCAGGGCCAT CCGGTTCGAA CAGCGATTCG GATTCAGGAT CGGCAAGCAG ACCGTGGCGC TCATCCGGAA TGCGGTCCGC ATGGGGTTGC TTCAGAAGCT GGGGGGCCGT CGCCTCCTGC ATGAAATCCA GCTCATCATG GTGGAAGACG ATCCTTTGCC GCCTCTGCGC CGCATGAACG AGTTCGCCGT GTGGCCGGTG CTGAGCGCCA ACATCCTGTT CGATCAGAAG CTGGAGGATT TGTTCGTTCG GTTGCGCGAA GTGGTTTCCT GGCACCGGTT GAGCTTCCTG GATGAGCCTC TCGAGCGCTG GTGGGTCTAC ATGCTGGGCC TGTTTTCAGG CCTGGCGGCG GCCGACGTGG AGGACGCCTG CGGCAGGCTG CAGTTCACCG CCGGCCAGCG GGAACGCATT GCCTGGGCTT ACCGGACGGT GAGCGGACTG CTCTGGGGGT TTTTCCCCGC GGCAGAGCAC AAACCGAGCG CAATCTTCCG GGCGCTCCAG CCGTTCAAGC CCGAAGAACT GGTTTTTATG ATGGCGAAGG CGCAGGACGA AACACCGCGG CGTGCCGTCA GCCACTATTT CCATCGCTAT CGACACGTTT CCACCGAACT GAAGGGCAGG GATCTCAAGG AAATGGGTGT GCCGCCCGGG CCTATCTACC GGGTGATTCT GGATGAACTG CTGGATGCGC GTTTGAACGG CGAAGTGAAA GACCGCCAGG AAGAGCTTGC TTATCTGCGC GAGCGGCATG CGGAGCTCTT CGGCGGGGAA GGGGAGGTCC CCGACCCGGC TTCGTGA
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Protein sequence | MEVITTHINA DFDAMASMIA AKKLYPDAVL VFPGSQEKTL REYFINSTVY IYGFKRLRDL DLDRVSRLIL VDTRQISRIG RFVEILDRPG MDIHVYDHHP DAEDDIQGVF NLIKPVGATV TILTQLIRER GLEVTPEEAT IMSLGLFEDT GSFTFNNTTP EDFEAAAFLL RSGADLNAVS DMVTQELTAE QVGLLNELIT SAKTYGIAGI DVCIATVSVE KYVGDFAVLV HKLKDIENLD VVFALARMDD RVYLVGRSRI PEINVSTVAA YFGGGGHATA ASASIKDLTL FQVENKLLEF LRSYIHPYPT AESMMTSPVI FTEPEVTVAE AGQSMIRYNI NSMPVMEDGR IVGLTTRQVL EKAIFHGLEK RAVREFMTTD FSTVGPNATL LEIESYLVER HQRIVPVMED NRVIGVITRR DLLKFLVEDQ TTNARSLYGD TNLAAWSKRK NVVAVIMEQL PREIVQTLKD FGKLAKDLGM KAYAVGGFVR DLLLRRSNLD IDIVVEGDGI EFARTYAREH GIRCRFHKKF NTAVLIFPDD RRVDVASARF EYYQYPAALP IVEFSSLKMD LYRRDFTINT LALALNPGEF GQLIDFFGGQ RDLKDKTIRV LHNLSLVEDP TRILRAIRFE QRFGFRIGKQ TVALIRNAVR MGLLQKLGGR RLLHEIQLIM VEDDPLPPLR RMNEFAVWPV LSANILFDQK LEDLFVRLRE VVSWHRLSFL DEPLERWWVY MLGLFSGLAA ADVEDACGRL QFTAGQRERI AWAYRTVSGL LWGFFPAAEH KPSAIFRALQ PFKPEELVFM MAKAQDETPR RAVSHYFHRY RHVSTELKGR DLKEMGVPPG PIYRVILDEL LDARLNGEVK DRQEELAYLR ERHAELFGGE GEVPDPAS
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