Gene Sfum_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0644 
Symbol 
ID4460388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp775087 
End bp776340 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content59% 
IMG OID639701400 
Producthypothetical protein 
Protein accessionYP_844778 
Protein GI116748091 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTC CCAGGAAGGT TTATGAGTTC TTGAAAGCCG CTTCCGTGGC TCACGCGCGA 
TGGGACTACG AAGTCTCGTT GTCCATCATC AGGAACAGGA AGAAGCTGCT GATTCTCTTG
CTCATGCTCA CGCCGATCCT GGCCGGGTCG CTGCTTGAAG CGGCTTCCCT GCTGGGGGGG
AAGGAAGCTT ACGCTCCCGC CTATTATTCG ACCATGATCT TCGTGGTGTC CATGGCCATC
GGGCTGGCGG CCGGTCTCAT CACGGGGTGT ATCGGCGCCG GCGGCGGTTT CATCATCACC
CCCGCGTTGA TGGCCGCCGG GGTCAAGGGC ATCCTGGCCG TCGGCACCGA CCTGTTTCAC
ATTTTTGCCA AGGCCATCAT GGGTACGGCC GTCCATAAAA AGCTGGGAAA CGTTTCGACC
AAGCTGGCCG TTGCGTTCCT GGTGGGGTCC GCAGGCGGAA CGTTTATCGG CGGCGCCTTG
AACAAGGGGC TCTACAACAA GGATCCCCTC CTGAGCGAAG CATTCATCAG CGCGGTCTAT
GCAATTCTTC TCGGATTCCT GGGCTTCTAC GCCCTCATCG ACTTCCTGCG CTCGAGAAAA
GCGCCCGGGG GAGGCGGCGA CGCTCACGGC GGCGGCCCTT CGGGAACCCC GTCCGTGGCC
CTCAAGCTCC AGTCCATGAA CCTTCCGCCC ATGATCCAGT TCGATGAGGA TTTCGTTCCC
GGCGGGAAAC GCATCTCCGG CGTCGTTGTG GCGCTGGGCG GCGTCGTGGT GGGTATTCTG
GCCGCTATCA TGGGGGTCGG CGGCGGGTTT GTCACGTTTC CCATGTTTGT GTACATCTTC
GGCGTTTCCT CGATGACGAC CGTGGGCACC GACATTCTGC AGATCATCTT CACCGCCGGT
CTTGCCGCGA TCGGACAGTA CGCGATTTAC GGCTACGTCT TTTACACCCT GGCGATGGGC
ATGCTCATCG GTTCGCTTTT CGGCATCCAG GTCGGAGCGC TCACCACCAA GGTCGTGAAG
GGCATCCACA TCCGTGGATT CTACGCCGTT TCGATCATCG CCGGATTTGT CAACCGGGCC
GCCACGTTGC CCAAGAAGCT CACTGAGCTG GAGGTGTTTA ACATTCCGAA GCCGGTATAT
TCGGCAATCG AGACCTTCGG CAACATCGTG TTCTGGATCG TCGTCGCAGC CTTCGGTATT
TGGATTTTCA GCAAGTTCTT CAGCAATATC GGATCGTTGA GGGAGGAGGA ATAG
 
Protein sequence
MSVPRKVYEF LKAASVAHAR WDYEVSLSII RNRKKLLILL LMLTPILAGS LLEAASLLGG 
KEAYAPAYYS TMIFVVSMAI GLAAGLITGC IGAGGGFIIT PALMAAGVKG ILAVGTDLFH
IFAKAIMGTA VHKKLGNVST KLAVAFLVGS AGGTFIGGAL NKGLYNKDPL LSEAFISAVY
AILLGFLGFY ALIDFLRSRK APGGGGDAHG GGPSGTPSVA LKLQSMNLPP MIQFDEDFVP
GGKRISGVVV ALGGVVVGIL AAIMGVGGGF VTFPMFVYIF GVSSMTTVGT DILQIIFTAG
LAAIGQYAIY GYVFYTLAMG MLIGSLFGIQ VGALTTKVVK GIHIRGFYAV SIIAGFVNRA
ATLPKKLTEL EVFNIPKPVY SAIETFGNIV FWIVVAAFGI WIFSKFFSNI GSLREEE