| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0622 |
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| Symbol | |
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| ID | 4461684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 749278 |
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| End bp | 751539 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701378 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_844756 |
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| Protein GI | 116748069 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA AGGAACGGCT CAAGCTCCAC AGGGTTCTGA AAATCATAGG CGTCGTCAGC
CTGGTGATGG TCGGCATCGC TTTTTACCTG GGAATCACTT CGTCCAGGCA CATGAAGGGA
GTCATCCGGG GGCAGTTCAA CGACCAGCAG CTCGTTCTGG CCAGAACGAC GGCCGAGAGG
ATCGAGAGGA ACATCCAGAA CGCCATCGCG GACCTGACCC TGCTCAACTC CCTGCCTGCG
GTGCAGTACA ACGATCCCAA CAGTTACGAT CAACTGCTCA TGTCGACCAT GCCGGTCCTC
TACAGGGACA ATATCATCGA AATCAGGCGG GTGGACCGGG ACGGGAACAC CATGTTCATC
GCCAACGATC AGGGGATAGC GACCGGGTAT TACGGGGTCG TTCCGCAGGA GGCGGGCGCG
TACATGTCGT GGGCCTCGGA GCTCAGCAAC CGCGGAAATG TGATGGGTAC CGGCGCGCGT
CCCCGAGATC CTTCGAAGGA CAAGAAATCC ATCGTGCTGG ACTTGATCAC CCCCACCCGC
GAGGAGGCGG TCGACGCCTT GCACCCGCGC CCGTCCCGGG GATTCGCCGG ATATTTGAAG
GTGACCCTGG ACGTCAGCAA GCTGCTGCGC GAAATCATTC CCCCCATAAG GTCGGGGAAG
ACCGGGTATG CCTGGGTGAT CGACTCCTCG GGGAACTTTC TCCACCATCC GGAGGCATCC
TTTATCGGAG AGAACGCATT CGAGGTGAGA AGCAGCCGGA ATCCCGCCAT TTCGTTCAAT
GACATCAATC AGATCCAACG CGAGGAGATG CTCAGGGGCA AGGAGGGCAG GGGGACGTAC
ACGTCCGGTT GGCATCGCGA TGTGGCGGCG CCCATGGAAA AGCTCATCGC CTATTCCCCG
GTGCGAATCC AGGGGCCTTA CCTGACCTAC AACTGGTCCG TCGCCGTCGT CGCGCCCGCG
GACGAAGTGG AGGCGGAGGT CAGCCAGATT TACGGAAAGC AGATTCTTCT CCAGGGATTC
GTTATTTTCA TCATTGTCCT CGGGAGTGCC AGCGTGGTCC TGCACGAGCT GCGCTGGTCG
ACGATTCTGG AGCAGGAAGT CGCGCTCAAG ACCGATGATA TCCGCCGCTA CACGGGGGAG
CTGGAACGAT CCGAGGCCAA GTACCGGTCG CTCATCGAGA GCGCCGAAGA CATGATTTTC
ACACTGGATT CCGCGGGGGT CATCAAGACG GCCAACCAGC ACATGGCCAG GGTCTTCGGG
GTGAGCGGGG AGGAATTGGC CGGACAGAGC CTTTTTCGTT TTCTGCCGCG GGAGCAGGCA
ACGGAGCAGC TTGACATCGT GCGCAAGGCG CTGAGCTCGG ACAAGGCGCA GCGGGCCGAA
TCGGGCTTCA ACCTGCACGA CAGGGAGCTT TGGTTCAACA TCCAGTACAT ACCGGTCCGG
GAAGCCGGCA GGGAGCACGA ACACGTTCTC GGCATCGCCC GGGACATCAC CGATCGGAAA
AATCTGGAGC GGCAGTTGAT CAATTCCGAA AAGCTCGCTT CCCTGGGCAC TCTGGCCGCG
GGAGTCGCCC ATGAGATCAA CAACCCCATC GGAATCATGC TCGGCTTCTG CGACCTGATG
CTCGAGCGCA TGGATCCGGG AACCATGGAA TACAACGATC TCAAAACAAT CGAGCGGCAC
GGGCTGCACT GCAAGAGCAT CGTGGAAAGG CTGCTCAGTT TCGCGCGCAT GAGCGAGGAA
GCCGAAGACC GATGTGACTT GAACGAGAAC ATTCAGGAAG TCGTCTCGGT GGTCAAGCAC
ACTCTTGACA TAAACCGGAT CAGGCTGGAG ACTGCTCTGG CCTCCGACCT GCCCCCGGTG
AACATCGACT CCAGGGGGTT GCAGCAGGTG CTGCTCAACC TTGTGGGGAA TGCCATCCAC
GCCATGGATG GCGATGGGGT CCTGAGGATA ATCAGCAGAA CGGGGCGTCG CGAGGAGGAT
GTCGAGTTGA TCGTTGCCGA CACGGGCTGC GGCATCAGAA AGGAACTCAT CGCCAAGATC
TTCGACCCGT TCTTCACCAC CAAGAAGGTG GGTGAAGGCA CCGGGCTGGG CCTTTCGGTG
AGCTACGGCA TCGTTTCGAA ATACGGCGGG ACCGTTGAGT GCGCGAGCCA CGCCGAGGAG
GACGGTCCGG GGGAAACGGG GACGGTTTTC ACTGTCACGT TGAAAACGAA GAAAGACGCT
TTCGACGAAA CCACCGACCC TTCTGTGCCT CCACTGGGTT GA
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| Protein sequence | METKERLKLH RVLKIIGVVS LVMVGIAFYL GITSSRHMKG VIRGQFNDQQ LVLARTTAER
IERNIQNAIA DLTLLNSLPA VQYNDPNSYD QLLMSTMPVL YRDNIIEIRR VDRDGNTMFI
ANDQGIATGY YGVVPQEAGA YMSWASELSN RGNVMGTGAR PRDPSKDKKS IVLDLITPTR
EEAVDALHPR PSRGFAGYLK VTLDVSKLLR EIIPPIRSGK TGYAWVIDSS GNFLHHPEAS
FIGENAFEVR SSRNPAISFN DINQIQREEM LRGKEGRGTY TSGWHRDVAA PMEKLIAYSP
VRIQGPYLTY NWSVAVVAPA DEVEAEVSQI YGKQILLQGF VIFIIVLGSA SVVLHELRWS
TILEQEVALK TDDIRRYTGE LERSEAKYRS LIESAEDMIF TLDSAGVIKT ANQHMARVFG
VSGEELAGQS LFRFLPREQA TEQLDIVRKA LSSDKAQRAE SGFNLHDREL WFNIQYIPVR
EAGREHEHVL GIARDITDRK NLERQLINSE KLASLGTLAA GVAHEINNPI GIMLGFCDLM
LERMDPGTME YNDLKTIERH GLHCKSIVER LLSFARMSEE AEDRCDLNEN IQEVVSVVKH
TLDINRIRLE TALASDLPPV NIDSRGLQQV LLNLVGNAIH AMDGDGVLRI ISRTGRREED
VELIVADTGC GIRKELIAKI FDPFFTTKKV GEGTGLGLSV SYGIVSKYGG TVECASHAEE
DGPGETGTVF TVTLKTKKDA FDETTDPSVP PLG
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