Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0546 |
Symbol | |
ID | 4461197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 663604 |
End bp | 665037 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701302 |
Product | cytoplasmic peptidoglycan synthetase domain-containing protein |
Protein accession | YP_844680 |
Protein GI | 116747993 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.18293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.62301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCA AGAATTCTAA GACCATCTAT CTGCTCGGCA TTGGCGGAAT CGCCATGGGC ACCCTGGCGA CAATGCTGAC GGAAAAAGGC TTCAACGTCA CGGGGTCCGA TCTGAACCTC TATCCCCCCA TGAGCACTCA CCTGGAAACG CTCGGGATAC CGGTCTGCCA GGGATACGAC GCCGCCAATC CGGAGAAGTG CGCGCCGGAT CTCGTCATCA TCGGCAACGC CATCCGGAGA ACCAACCCGG AAGCCGAGTA CGTGCTGAGC CATGGTCTGC CGTACCTTTC GATGCCTCAG GCCATAGCGG AATTCTTCCT GTGCGCCCAC AAGAGCATGG TCGTTGCCGG CACGCACGGG AAGAGCACCA CTTCTTCCCT GCTGTCCTGG GTGCTGTCCC GGGGCGGGCT GGATCCGAGC GTTTTTGTGG GAGCGTTCAT AAAGAACTGG AACAGCAGCT ACCGTATCGG CCGCGGCCCT TTCATGGTCA TTGAAGGCGA CGAGTACGAC ACGGCGTTTT TCGACAAGGG ACCGAAATTC CTGCATTACT CACCCTGGAT CGGCATTGTG ACCAGTGTCG AGTTCGATCA CGCGGACATC TTCACGGATT TCGAGGCTGT CCGCCGCGCC TTTCGCTCTT TCGCGCGACT CATCCAACCC GACGGCCACC TGATCCTCAA CGCCGACGAC GCGAACTGCC TGGCCCTGGC AAAAGAATCC CGCGGCCGCG TAACCACCTA CGGGTGGTCC CGGACTGCCG ATTGGCGTAT TGTCGATATG ATTCACACCG ACGGACGGAT TCGATTCACT TATGAGAATC CCCTGTCGCG GGGAACGGAG TCGATACTGA CGCGCATGCC GGGCAGGCAC AATGTGAGCA ATTCCATGGC CGTGATGGCC GCGGCCTCGC TTGCGGGTCT CGACAGGAAC GCGGTGCAGG ACGGGTTGCT GACTTTCGAA GGCGTGAAAC GGCGCCAGGA CATCCTGGGT GAAATCGGCG GGATTCTGGT CATGGACGAC TTCGCCCATC ACCCCACGGC AGTCCGGGAA ACCATTCAGG CATTGAAGGA CTTCTATCCC CGAAGGCGCA TTTTCTGCGC CTTCGAACCG AGGACCAACT CGAGCCGGCG CAGCGTATTC CAACAGGCCT ACACGACTGC TTTCGACGAT GCTTTCTGCA TCTGCATCAA GCATCCCCCC GGCATGGACG CCATTCCACG AGAAGAACGG CTGGATGTCC AGAAACTGGT TGCCGATATC GCCGAACGGG GAAAGGAGTG TCACGGCTTT GCATCGGCAG AAGATCTCAT CGGCTTTCTG GTCGACCACT GCGCTTCGGG AGATCTTGTC GTGTGCATGA GCAACGGGAG TTTCGACGGA CTGCCGCACG GACTTTGCAC CGCCCTGGCG CAAAAGCATG CAGGTGCATC ATGA
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Protein sequence | MRRKNSKTIY LLGIGGIAMG TLATMLTEKG FNVTGSDLNL YPPMSTHLET LGIPVCQGYD AANPEKCAPD LVIIGNAIRR TNPEAEYVLS HGLPYLSMPQ AIAEFFLCAH KSMVVAGTHG KSTTSSLLSW VLSRGGLDPS VFVGAFIKNW NSSYRIGRGP FMVIEGDEYD TAFFDKGPKF LHYSPWIGIV TSVEFDHADI FTDFEAVRRA FRSFARLIQP DGHLILNADD ANCLALAKES RGRVTTYGWS RTADWRIVDM IHTDGRIRFT YENPLSRGTE SILTRMPGRH NVSNSMAVMA AASLAGLDRN AVQDGLLTFE GVKRRQDILG EIGGILVMDD FAHHPTAVRE TIQALKDFYP RRRIFCAFEP RTNSSRRSVF QQAYTTAFDD AFCICIKHPP GMDAIPREER LDVQKLVADI AERGKECHGF ASAEDLIGFL VDHCASGDLV VCMSNGSFDG LPHGLCTALA QKHAGAS
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