Gene Sfum_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0543 
Symbol 
ID4461194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp662072 
End bp662665 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID639701299 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_844677 
Protein GI116747990 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.879016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.559161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA AGTGCATTGA GATGAGATGG CACGGCCGCG GCGGGCAAGG TGCGGTCACT 
GCGGCGATGA TTATGGCGGA AGCCGCCTAC TACGAGGGGT ACCGGGGGGT CACTGCGGCC
CCTTTCTTCG GAGCGGAAAG AAGAGGCGCC CCGATCATCG CGACCACCCG GTTCGGAAGA
GAGCCGATTC GCACGTTCTC ACTGGTGGAA CAACCTGACA TCGTGGTCGT CCTGGACGAG
ACCCTGCTGA GGGTCGTGGA CGTGAGCGCG GGCGTGGGCC CCGAGGGAAT CGTGATCATC
AACAGCGCAA AAGAGCCCGG TGCGATCCGG TTGAAGAATG CGGTCAACGT CGCAACGACC
AACGCCACGG AATGGGCGAA GGAGGCGGGC CTCATCATAT CGGGAGCGGT TATCTTCAAT
ACCGCGATAT TGGGCGGCGT GGCCAGGGCC ACGGGGCTGA TCAGTCTGGA GAGCATCGAA
AAGGCGTTGC GGAATCACTT CCCGGGAAAG GCCGGCGAGA GAAATGTCGA GGGTGCGCGA
GCGGCCTATG CCGGGACCTC GATCCTGCAG GAATGCAAAC TGGCTTGTGC GTGA
 
Protein sequence
MTKKCIEMRW HGRGGQGAVT AAMIMAEAAY YEGYRGVTAA PFFGAERRGA PIIATTRFGR 
EPIRTFSLVE QPDIVVVLDE TLLRVVDVSA GVGPEGIVII NSAKEPGAIR LKNAVNVATT
NATEWAKEAG LIISGAVIFN TAILGGVARA TGLISLESIE KALRNHFPGK AGERNVEGAR
AAYAGTSILQ ECKLACA