| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0533 |
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| Symbol | |
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| ID | 4460571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 650093 |
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| End bp | 651862 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701289 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_844667 |
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| Protein GI | 116747980 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.18439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.721981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC CCGCGGAACA TGTCGTCTGG AACCTCAACG ATCTATACAG CGGCCCCGAC
GCGCCGGCGA TGGAGCAGGA CCGCCAATCG GCCAACGATC TCGCCGTGCA GTTCGCAGCC
AGGTACCGAG GCAAGGTTGC CGCGCTTTCC CCCGAGGAAG CCTCTGCCGC CATACGGGAA
TACGAAGCCC TGCAGGAAAT CCTGCAAAAG CTCGATGCCT ACGCCGCTCT CCATTTCGCC
ACGCGGACGC GGGACCCGAG TACCGGCGCG CTGCTGCAGG CGATTCGCGA ATTTCGCAGC
CAGGTTCATC GCGATACGCT GTTTTTCGAG CTCGAATGGG CTCAGATCGA CGACGAAGCC
TTTGCGGCCG CCCTGCGACA CTCCGCACTC GGTCCCTACC GCCATTATCT GGAATTGTCC
CGCCGTTACA GACCCCATCT GCTCACCGAG CCGGAAGAGA AGATCCTGGC GGAAAAGGAA
CCCGTGGCCA ACGACTCCTG GACCACGCTT TTCGACAAGG TCCTGGGACA CCTCCGCTTC
GGCCCGGGCG AGCGCACGGA ATCCGAAGTC CTGAGCGACC TCTACGCAGG CGATCGGACA
GTCAGGCAAC AGGCCGCGCG CGAGCTGACG CAAGGCTTGA CGGAAATGCT TCCCGTTTTG
ACCCACATCT TCAACACGAT CCTTTTGGAC AAGGCCGTTA CCGACCGGTT GCGCCGGTAT
CCGCACTGGC TCAGGGCGAG GAATCTCGCC AACGAGGCGG AAGATGTAAT GGTGGAAGCT
CTGGTTGAAG CCGTCTCTTC GCGTTACGAC GTCGTCCGGC GTTATTACCG GCTCAAGCGG
ACGCTGCTCG GTTACGAAGA GCTGTTCGAC TACGACCGCT ATGCGCCCAT ACCCGGACTG
CCGAAAAAGG CTTTTTCATG GGAGGAGGCA AAACACCTGG TACTTTCGGG TTTCGAAGCG
TTTTCGCCGG AATTCGCTGA AATTGCGTCG GATTTCTTTC GTCACAACTG GATCCACGCC
CCCGTGCTTC CCGGCAAACG CAGCGGAGCG TTTTCTCACC CCACCGTTCC TTCCTGCCAT
CCGTACGTGC TCGTCAACTT CACGGGAACG TCCAGGGACG TGGCGACCCT CGCCCATGAA
CTGGGGCATG GGGTCCACCA GGTTCTGGCG AGAAAACAGG GGCTGCTCAA CGCCGACACT
CCGCTCACCC TGGCCGAAAC CGCCTCGGTG TTCGGGGAGA TGATCGTGTT TCGGCACCTT
CTCGAACGGG TCGAATCCCG CAAGGAACGC GCCGCCCTGC TTTGCAGCAA GCTCGAAGAC
TCTTTCGCGA CAGTGTTTCG CCAAGTGAGC ATGAACCGCT TCGAATCCGC CGTCCACAAC
CAGCGCAGGT CCGGCGGAGA ACTCGACCCG GAGCGGATTT CACAATTCTG GCTCGATTCG
CAGAAACAGA TGTTCGGGGA TTCCGTCACG CTCACCGGGG ACTACCGCAT ATGGTGGTCC
TATATCCCCC ATTTCATTCA TTCCCCGGGC TACGTGTACG CCTATGCCTT CGGCGAGCTC
CTGGTGCTCT CCCTCTACCG GCAGTACCGG CAGACGGGTG CATCCTTCGT GCCCCTCTTC
CGCGACCTCC TCGAAGCCGG TGGAAAAGCA AGCCCGAATG AGCTCCTGTC GCCTTTCGGC
ATTGATCTTT CAGACCCTTC CTTCTGGAAA CGGGGGCTGG AGGTGATCGA AGGGATGTTG
GACGAGGCGG AACAATACGC TCGATCCTGA
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| Protein sequence | MNDPAEHVVW NLNDLYSGPD APAMEQDRQS ANDLAVQFAA RYRGKVAALS PEEASAAIRE
YEALQEILQK LDAYAALHFA TRTRDPSTGA LLQAIREFRS QVHRDTLFFE LEWAQIDDEA
FAAALRHSAL GPYRHYLELS RRYRPHLLTE PEEKILAEKE PVANDSWTTL FDKVLGHLRF
GPGERTESEV LSDLYAGDRT VRQQAARELT QGLTEMLPVL THIFNTILLD KAVTDRLRRY
PHWLRARNLA NEAEDVMVEA LVEAVSSRYD VVRRYYRLKR TLLGYEELFD YDRYAPIPGL
PKKAFSWEEA KHLVLSGFEA FSPEFAEIAS DFFRHNWIHA PVLPGKRSGA FSHPTVPSCH
PYVLVNFTGT SRDVATLAHE LGHGVHQVLA RKQGLLNADT PLTLAETASV FGEMIVFRHL
LERVESRKER AALLCSKLED SFATVFRQVS MNRFESAVHN QRRSGGELDP ERISQFWLDS
QKQMFGDSVT LTGDYRIWWS YIPHFIHSPG YVYAYAFGEL LVLSLYRQYR QTGASFVPLF
RDLLEAGGKA SPNELLSPFG IDLSDPSFWK RGLEVIEGML DEAEQYARS
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