| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0527 |
|---|
| Symbol | |
|---|
| ID | 4460564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 641687 |
|---|
| End bp | 642571 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639701282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844661 |
|---|
| Protein GI | 116747974 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.641054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGAC GCGAGGTTAC AGAGGCAAGA TTCCTTCAAA GATGTAACCA ATATGCTTGG
CTTGAGGAAG CCGTCGGAGT CACGCGTCTC GCCCGATTTC CCTCGCTGGA GGTCGACCCG
GAACGAGTGA ATCTCAGCGA TGCAACCAGG CTCGCAGATG AAGTCAGACG GCAATTCGAT
CTTGGGAACA GGCCCGCTGC AGTCTTGGAA AAAACCCTGG AGGATGTTTA CGGAGTCAAG
ATCTGGTATG ACAAACTGGA GGAAGGCTCT GCCGCATCGG TTTGGGGGAA GTTCGGACCC
GCCATACTGA TGAATTCGAG GGAGGCGCCG TGGCGCCGAA ACTACAATTT TGCTCACGAG
GTGTTTCATC TCATAACCTG GAATAGCCTC CCGCCCGGTC TGCTCTCCGA ACAGAGTGAT
CTGCGGAGCA AGGTGGAATC GATTGCCAAC GCGTTCGCGT CACAACTCCT GCTGCCGGCT
GATCCGGTGA GGATGGTATT CTACGCTCGA GTCACGGAGA GCAAAATAGC GTACAGCGAT
CTAGTTGACT TGGCGCGGAG TTTCGATGTT TCGACTGAGG CACTCCTCTA TCGTCTCCTG
AATTTGAATT GTTTTCCGAG GGCAGCGGTT ACCAAAATGC TGCGCGACCC AGCCTTCAGG
GAACTGGACC GCTGCTCCAT GTCCGAATGT TGGCACAGCC CTCCGGAGAT TCCGGAACGC
TTCGTTCGAC TCGCATTCCT GGCCCACCAG AAAGGCAAAT TGTCCCGATC CAAATTCGCC
TCCTTGCTCG GAGCCAGTAT TGCCGATCTC AATGATGTCC TGAGAAAATA CGGGTTTGGT
GATGAAAAAG ACAACGCCGG CAAAACAAAA GTGCGTGTTG CTTGA
|
|---|
| Protein sequence | MQGREVTEAR FLQRCNQYAW LEEAVGVTRL ARFPSLEVDP ERVNLSDATR LADEVRRQFD
LGNRPAAVLE KTLEDVYGVK IWYDKLEEGS AASVWGKFGP AILMNSREAP WRRNYNFAHE
VFHLITWNSL PPGLLSEQSD LRSKVESIAN AFASQLLLPA DPVRMVFYAR VTESKIAYSD
LVDLARSFDV STEALLYRLL NLNCFPRAAV TKMLRDPAFR ELDRCSMSEC WHSPPEIPER
FVRLAFLAHQ KGKLSRSKFA SLLGASIADL NDVLRKYGFG DEKDNAGKTK VRVA
|
|---|
| |