| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0504 |
|---|
| Symbol | |
|---|
| ID | 4461581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 609455 |
|---|
| End bp | 610006 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639701260 |
|---|
| Product | MucR family transcriptional regulator |
|---|
| Protein accession | YP_844639 |
|---|
| Protein GI | 116747952 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4957] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000938261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AGCTGCTTGA TATCGCTGCC GAAATCATTC AGGCCCAGGC GTCCGTCGGC
CAGATGACGC CGACCCAAAT TGAAGAAGCA CTCATCAAGA CCTTTTCCAC GTTGCAGAAG
ATGCAGAAAG CGGAAGAAAA AGGCCTCTTT CTGGACGTGG CGGCCATTGG AGAAGGCGTT
GCGCTCGAGG GTGGAGCTTC ATTGAAGCAG GACCCGAAAA GCTCAATCCA GGACGACAAG
ATCACCTGTT TGGAATGCGG GACACAAATG CGCCAGCTTA CGGCAAGGCA TCTGAGCGCT
CACGGTCTCA CCCCGAGAGA GTATAAGAAG AAATGGGGGT TTTCGTTTAA GCAGCCGCTG
TCGGCGAAAT CGCTGACCAA GGCGAGAAGC AAAGCGGCCA AGAAACGCGG ATTGCCGGAA
AACCTGGTGA AGTTCCTGGA ACAGAAAAAG CAGGAAAAGG CTATGGCCGA GCAGGCATCG
GCCACCACCG AATCGGGCAC CGGTTCTTCC CCGAAACCGA TGACCAAGCG GAGGCCGGCA
AAGCAGGTTT GA
|
|---|
| Protein sequence | MTKKLLDIAA EIIQAQASVG QMTPTQIEEA LIKTFSTLQK MQKAEEKGLF LDVAAIGEGV
ALEGGASLKQ DPKSSIQDDK ITCLECGTQM RQLTARHLSA HGLTPREYKK KWGFSFKQPL
SAKSLTKARS KAAKKRGLPE NLVKFLEQKK QEKAMAEQAS ATTESGTGSS PKPMTKRRPA
KQV
|
|---|
| |