| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0483 |
|---|
| Symbol | |
|---|
| ID | 4461490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 579917 |
|---|
| End bp | 580696 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639701239 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_844618 |
|---|
| Protein GI | 116747931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0518313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCA AACGGATCAT CCCCTGTCTC GACGTTCGCG ACGGGCGGAC AACCAAGGGG
ATAAAATTCA GGAACAACGT CGACATCGGC GACCCGGTGG ACATGGGACG ATTCTATTAC
GAGGAGGGCG CCGACGAGAT CGTGTTCTAC GACATCACCG CGTCGAGCGA TCGTCGGGGC
ATCATGCTGG ACGTGGTGAA AAGGGTTGCG GAGACCATCT TCATCCCCTT TTCCGTCGGC
GGAGGGATCA GGACCCTCGA GGACATGCGG GACGTGCTCC TTGCGGGTGC CGAGAAGGTC
AGCGTGAATT CCGCCGCGGT GCTCAATCCC GATATCATAA GCCAGGGCGC GGAAGCGTTC
GGGAGCCAGT GCATCGTCCT GGGGATGGAC GTCAAACACG TCGCGCCCTC CACCAGGATT
CCTTCCGGCT ACGAGATCGT GATCAACGGG GGCCGCACGA CCACGGGATT CGATGCGCTC
TGGTGGGCAT TGGAGGCGGA GCGCCTGGGA GCGGGAGAGA TCTGTCTCAA TTCGATCGAC
GCCGACGGCA CCCGCGACGG CTACGAGTTG AGGCTGACCC GGCTGATCTC CACCAGCGTC
CGGATCCCGG TCATCGCATC GGGCGGAGCC GGAACTCCGA ATCATCTGGC CGACGTGCTG
AAGCAAGGCC GGGCGGACGC CGCGCTCATC GCCTCCATGG TCCACTACGG CACCTACAGC
ATCCGCCGGA TCAAGCAGTT TCTGGACGAC AACGGCATAA GGGTGCGGAA AACCTGGTGA
|
|---|
| Protein sequence | MLSKRIIPCL DVRDGRTTKG IKFRNNVDIG DPVDMGRFYY EEGADEIVFY DITASSDRRG
IMLDVVKRVA ETIFIPFSVG GGIRTLEDMR DVLLAGAEKV SVNSAAVLNP DIISQGAEAF
GSQCIVLGMD VKHVAPSTRI PSGYEIVING GRTTTGFDAL WWALEAERLG AGEICLNSID
ADGTRDGYEL RLTRLISTSV RIPVIASGGA GTPNHLADVL KQGRADAALI ASMVHYGTYS
IRRIKQFLDD NGIRVRKTW
|
|---|
| |