Gene Sfum_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0481 
Symbol 
ID4461488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp577760 
End bp579112 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content59% 
IMG OID639701237 
Productphosphomannomutase 
Protein accessionYP_844616 
Protein GI116747929 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00838826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATCCGA ACGTCTTTCG AGAATACGAT ATCAGGGGTA TTGTCGGTTC TGAAATCCGG 
GACCGTGACG TCTACCTGCT GGGCAAAACC TTCGGCACCT ATATGGTCCG TCAGGGAAAA
TCCCGGGTGG TCGTGGGAAG GGACTGTCGT CTGAGCTCGG ATCGGTTCCG GGATTTGCTC
GTGGAAGGGA TGCTGGAAAC GGAGCTCGAT ATCGTCGACC TCGGCGTTTG TCCCACTCCG
CTCCTCTATT TTGCGCTTCA TCACCTGAAG CGGGAGGGCG GCGTGATGAT CACCGCCAGC
CACAACCCTC CGGAATACAA CGGCTTCAAG ATCTGCAACG GTGTCGACAC CATCTCGGGA
GCTGAAATCC AGCGAATTCG GGAACTCATG GAGTCAAGGG ATTTTGCGGG CGGAAGGGGA
GAAATCAGGC AGTTCGCCAT TCAGGAGCCT TACATCGACT ACGTGCTCCA AAGCGTGCGC
CCGAAGCGGA GCCTGCGAAT CGGCCTGGAC GCGGGGAACG CCACCGGGGG ACCCGTCGCT
CTCCCCTTGC TCCGCGACCT GGGATGCCGG GTCTACCCGC TCTACTGCGA AATGGACGGC
ACCTTCCCCA ATCACGAGCC CGACCCCACG GTCATGGAGA ACATGCGGGA CATCCAGGAA
CTGGTTGTGA AGGAGAATCT GGATGTCGGC ATTGCACTTG ACGGAGACTG TGACCGGTTG
GGGGTCATCG ATCACCGGGG CGAAGTCGTT TTCGGAGACA AACTGATGAT CCTGTTCGCC
CGCGAAATTC TGTCCCGCCG TCCGGGTTCG CTGTTCATCT CCGAGGTGAA ATGCTCGAAG
ACGCTGTATG ACGATATCGA GCGCAACGGC GGCCGGGCAA TCATGTGGAA GGCGGGGCAT
TCTTTGATAA AAGCCAAGAT GAGGGAAGTC GACGCGGTTC TGGCCGGAGA GATGAGCGGC
CACGTCTTCT TCAAGGATCG ATATTTCGGC TTTGACGACG GAATCTATTC CGCCTGCCGC
CTTATCGAGA TCCTGGCGGC TACCGGGAAG ACCATTCCCG AGCTGCTGGA AGGCGTGCCG
CCGACCTTCA GCACTCCCGA AATCAGGATC CCCTGTCCCG ACGATATCAA ATTCGAGGTG
GTGGAACAGG CCAGGCGATC GTTTGCAGAA AAACAATTCC GGATTATCGA TGTGGACGGC
GCGCGCATCG TATTTCCCGA CGGCTGGGGG CTCGTGCGCG CATCCAACAC CCAACCCGTT
CTGGTGCTTC GCTACGAGGC CGATTCCCCC GAACGCCTGG ATGCGATCCG CAACCTGGTG
GAAGGGACAC TCCACGCGAT CATGAACCGT TGA
 
Protein sequence
MDPNVFREYD IRGIVGSEIR DRDVYLLGKT FGTYMVRQGK SRVVVGRDCR LSSDRFRDLL 
VEGMLETELD IVDLGVCPTP LLYFALHHLK REGGVMITAS HNPPEYNGFK ICNGVDTISG
AEIQRIRELM ESRDFAGGRG EIRQFAIQEP YIDYVLQSVR PKRSLRIGLD AGNATGGPVA
LPLLRDLGCR VYPLYCEMDG TFPNHEPDPT VMENMRDIQE LVVKENLDVG IALDGDCDRL
GVIDHRGEVV FGDKLMILFA REILSRRPGS LFISEVKCSK TLYDDIERNG GRAIMWKAGH
SLIKAKMREV DAVLAGEMSG HVFFKDRYFG FDDGIYSACR LIEILAATGK TIPELLEGVP
PTFSTPEIRI PCPDDIKFEV VEQARRSFAE KQFRIIDVDG ARIVFPDGWG LVRASNTQPV
LVLRYEADSP ERLDAIRNLV EGTLHAIMNR