| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0479 |
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| Symbol | |
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| ID | 4461486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 573770 |
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| End bp | 576496 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639701235 |
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| Product | ATP-dependent nuclease subunit B-like |
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| Protein accession | YP_844614 |
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| Protein GI | 116747927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.236866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000840779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAATC TCGAGTATCA AGAGAAGCTT CTGGACCTGA TAACCGACGG GCACACGGTG
CTTTCGGAAA CGGAGCGGTT TGCCAATCAG TTGAGACTGC GTGCCCGCGG GCGGTATCGC
AGACAAGGCG CGCCTGGCTG GGATGGGGTT GCGGTCGGGA CGTTCAACGC GTGGGCAATG
GACTGCTGGG AGGACTCATG GCCGAACGAA TGGCCCGCAT CGGATTTCAC GAGATGGCGG
CTGATCCGGG AAATCCTGCG GCACAATCCC CCCCCGGAAC CGCTTCTTCC TGACCTCCCG
CTTGTCGTCG CCGTCGACGA GAGCTTTGCG GGCTGTCTGC GTTACGGCAT CGACCCGGGA
GAGGGAGATC CCGCCAACCG CCTGGTGGAA TGGCGGCGCG GCGTGTGGAA GGAATACCGT
GACGCACTCC GCGCCTTGCT GCTCTTCCAT CCCGCGTCGC TTCCCGAACG TTTGGGTTCG
TTCCTGTCCC TGAACCCCGA CGCGGTTCCG TCGAAGACGG TGATAGCGGG ATTCGAGTTT
GCCGGGTACT GGGAGAAGAA GCTTTTCTCC CGGTTGGCCG ACACGCATGG TGCCCTCGCA
CTGCCGCTTC CACAGGTGAA GGCGAAACCG CGCGCCGTCG TCTACGCGGA TCGGGAACAG
GAAGTCTTCG GGCTGCTCGG CGACCTGATT CGTGGAGCCG GGGAAGGCCG TCTCCATGAG
CTTGCCGTGG TGCTTCTCGA TCGCGGGACG TATGCACCCA TCCTGTCACA ACATTTGAAG
GATCTTCTCG GAGCCCAGCT CGAAGGCGAG AATGCCGCCT ACAACCTGTT GGCCGGCGAC
GTGCTGACCT CCCAGTCACT CTGGAGGGCG GCGCTTCTGC CCCTGGATTT CTGCCTGGGC
GGCGAATCCG GGACGCAGCT GTTCAGCCTG TTGCGTTCAC CGTATTACGG TTATTTTGGA
GCCCGCGGCA GGGCGCTCGC GCAGTGGGAC CGGGTCTGGC GGGAGCAGGG AATCGAGAAG
GGGCTGACGG CCCTGCTGGG TTCCCTGGGC GGGCGGGAAG ATGTCCTGCC GCGGCGGGGT
GCGGAGCTGA CCGAAGGACT CGGCGCTCTC ACGGATCGTG GCACGCGTGC CGCATCCGAG
TGGAGCGCAG GCCTTCGATC GTTCTGGAAG CAAATGGAAT TTCCGGTCAT CGCCAATGAG
CGCGATCGGA TCGCCTGGCA GCGGCTGACC GGCCTGCTCG ACGGCTTCGA TGCCGAATTG
GGCGATTCTT CGATGCGTGC CGCGGAGTTT GCGGCATGGC TCACTGCGGC GGGAGAAAAG
GCTCCGGTTC AACCTTCGGG TTTCGAGGAC GCGGGCATTC AGGTAATCGG CGAGTTGGAA
CTGCGGGGAC TGGCCTTCAA AAGGCTGTTT GTGCCCGGCT TTCTTTCCGG CGTCATTCCG
CAGCCGGCCA GGTCCCTGCC GTTTCTGAGC GTGCGGGAGC GCAGGCTTGT TCTCGGCGGT
ACGGCGGAAA GCCAGTTCGA GTTCGCGGCA CATCTCTTCG GTCAGGTTCA GGCGGCGGCT
CGGGAAACCG TGGTGAGTCG CCCGTTGCTC GGCGAGGGGG GCGAACCTTG CCTGCCCTCT
CCGTTCTGGC CGGCGTCCGA AGAGACGATG GCCCCCGTGA TCCCGTGGCG CCATGACCTG
CCCGTGATGC AGAGGGCAAG ATGGGTGAGG GACGGCATTG AAGGGATCGC CGCGGCCATG
GAGCGCAAGG AGCCGGCCGG CAAAACGCAT GCCGGGGGCG AATCGGCTCC CGACCTTTAC
CGGGCCGAGC GTCTCCGGTT TCCGTCCGAG GTCTCCGTCA GCGAACTGGA GCTCTTGCTG
GCCTGTGCCG GGCGGTTCTT TCTGCGGGTC ATACTGGGAC TCGAAGCGCT TCCCGTCCCA
ACGCGCGGTC TTGACGCGGC GGTCCGTGGC CGGAAAATCC ACGCGCTCCT GGCCGGCTTC
GGCAGAAGAC TCCGAGGGAT TCCGGGCGGC CACGAGCGGG AGCCCGAAGC ATTGTGCCGG
CTGCTCGACG AGATGGTTCG CAAGGATATT GAAGAACAGG CTCGGGTTGC GCACTGGCGA
GTGGAACTCG CGAGGCTGCT GGGCGGAGCG GAAGGCGCGC CGGGCTTGCT CAAGGAATGG
CTCGCGCTCG AGTGTTCCAG GTTTGGGGAG GGGTGGCGTT GGACGGCGTT CGAACCGAGC
TTCGACAACT TGAAACTCCG CGATTGCCCG GTGGGGATCA AAGGGCGGCT CGACAGGCTG
GATCTTCATT CCGAGCTCGG TTGCATATGC TGGGACTACA AGACCGGCGC CGCGCCGGGC
ATGAAGGAAG TGCTCGAAGA CTTCAAAGCC CCGCAACTTC CGGTCTACCT GCTGGCCGTT
CGCAAGGGCC TGGTCCCCGC GATCGGAGAC CGCCGGGTGA CGTTGGCCGC CGGGTACATC
GCTCTTCAGT CCGTCCGCAA ATTGAATCAT TGCCTTGTGA TCGGAGCCGA TGAGCGGATG
GAATCCTTCC TGTCGCAGTG GGAATCGGTC CTTGCGGAGA AGATCGACGC TGCAAGGCGC
GGCCAATTGG CGCCATTGTG GGTTTTGCAG CCGTGCGAGG AGCGCTGCGA CTATGAATGT
CTCTGCGGAG AGCTGCTTTT TGCGGGGCCT GAAGCCGCGA GCGGTTGCGC AGCGCCGGGC
AACCCGGTCG AGCGCGGCCG GGGGTAA
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| Protein sequence | MTNLEYQEKL LDLITDGHTV LSETERFANQ LRLRARGRYR RQGAPGWDGV AVGTFNAWAM
DCWEDSWPNE WPASDFTRWR LIREILRHNP PPEPLLPDLP LVVAVDESFA GCLRYGIDPG
EGDPANRLVE WRRGVWKEYR DALRALLLFH PASLPERLGS FLSLNPDAVP SKTVIAGFEF
AGYWEKKLFS RLADTHGALA LPLPQVKAKP RAVVYADREQ EVFGLLGDLI RGAGEGRLHE
LAVVLLDRGT YAPILSQHLK DLLGAQLEGE NAAYNLLAGD VLTSQSLWRA ALLPLDFCLG
GESGTQLFSL LRSPYYGYFG ARGRALAQWD RVWREQGIEK GLTALLGSLG GREDVLPRRG
AELTEGLGAL TDRGTRAASE WSAGLRSFWK QMEFPVIANE RDRIAWQRLT GLLDGFDAEL
GDSSMRAAEF AAWLTAAGEK APVQPSGFED AGIQVIGELE LRGLAFKRLF VPGFLSGVIP
QPARSLPFLS VRERRLVLGG TAESQFEFAA HLFGQVQAAA RETVVSRPLL GEGGEPCLPS
PFWPASEETM APVIPWRHDL PVMQRARWVR DGIEGIAAAM ERKEPAGKTH AGGESAPDLY
RAERLRFPSE VSVSELELLL ACAGRFFLRV ILGLEALPVP TRGLDAAVRG RKIHALLAGF
GRRLRGIPGG HEREPEALCR LLDEMVRKDI EEQARVAHWR VELARLLGGA EGAPGLLKEW
LALECSRFGE GWRWTAFEPS FDNLKLRDCP VGIKGRLDRL DLHSELGCIC WDYKTGAAPG
MKEVLEDFKA PQLPVYLLAV RKGLVPAIGD RRVTLAAGYI ALQSVRKLNH CLVIGADERM
ESFLSQWESV LAEKIDAARR GQLAPLWVLQ PCEERCDYEC LCGELLFAGP EAASGCAAPG
NPVERGRG
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