| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0478 |
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| Symbol | |
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| ID | 4461485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 571023 |
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| End bp | 573344 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701234 |
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| Product | cysteine synthases |
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| Protein accession | YP_844613 |
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| Protein GI | 116747926 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0031] Cysteine synthase
[COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase
[TIGR01136] cysteine synthases
[TIGR01137] cystathionine beta-synthase
[TIGR01138] cysteine synthase B
[TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00249553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000140585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACTG TCTTTTCAAA CGTTCTTGAA TCTATCGGCA ACACGCCTCT GATCCGCATC
AACCGGTTGA ACCCGAACCC CGCGGTCACG CTGTATGCGA AACTGGAAGC GAAGAACCCC
GGCGGTTCCA TCAAGGACCG CACGGCGCTC TTCATGATTG AATCGGCCGA ACGCGACGGC
CTGCTGACTC ACGAGAAGAT CATCATCGAG GCCACGAGCG GCAACACGGG GATCGGCCTG
GCGATTGTCG CCGCCGTGAA GGGGTACCGG CTGATGCTTG CCATGCCCGA GACGGCCAGT
CTCGAGCGGC AGAAGATTCT CAAGGCGCTC GGCGCGGAGA TTCTGCTCAC TCCCGGAAAC
CTCGGCACGG ACGGCGCCAT TGAAAAGGTA TACAGCCTGG TCCGGGAAAA CCCCGACCGC
TACTATATGC CCGACCAGTT CAACAACCCG GCCAACCCCG CGGCTCATCA TTTCGGTACC
GGCCCGGAGA TCTTCGAACA GACCGAAGGC AAGGTCAATA CGGTCGTGGT CACGCTGGGA
ACCACCGGGA CGGCCATGGG TATACTCCAG GCCATGAAGG AGCGGGATCC CGCCATCAGG
GTTGTGGGGG TTGAGCCCTA CCCGGGGCAC CGCGTCCAGG GGCTCAAGAA CATGAAAGAG
TCCTATGTCC CGGGAATATT CGACCGGCAC GCCCTGGATC AGATCATCCA TATCAAGGAC
GAGGATGCTT TCGAAATGGC CAGGCGCCTC GCGCGGGAAG AAGGGATTTT CACCGGTATG
AGCTCCGGGG CGGCCATGGC CATAGCCGTC AGAGTGGCCG AGGAAATGCG GGAGGGCATC
GTCGTGGCCG TGTTGCCCGA CGGCGGGGAC CGGTATCTGA GCACCAACCT CTTCACCACG
CTCCTGGAAC CCGATTTTCA TTTCTTCAAC TTCCTCGAAA GGAAAAAAGT CGACTTCAAG
CCCGTGGTCG AGGGTAAAGT GAGAATTTGC GTTACCGGCC CGCCCCTCGA CAATCCCCTG
ACCCTCGGCG AATCGCGCCG GTTCCTGCTG GCGGATTTCC TGGCTCGATT TCTCACGGCC
AAGAGTTTCT CGGTGGAACA GGTCGTCCAG GTTCCCGATC TCGACAGCCG CACGATCGGT
GGGTCCCTCG CCTCAAGAAT GCCGCTCTCC GCCTACACGC GGCAGCAGCT CGACCTGATT
CTCGAGGACC TGGATCGACT CGCCGTCAAG AGGGCCTACC GCTATCCCCG TTCTTCGGAG
CACATCAACG CCATTACGGA AGACACCAAG ACCCTCGTCA ACAAGGGGTT GGCTTACGAC
AAGCTCCGGT CCGTGTACTT CAACCTGTCC GGCAGCAAGG ACTATGGAGC CCTCTCCAGG
GTCAACCTGA AGAAGATCCG AATCGGCACG ACGGTGGATC TCGACGCCTA TGAAAAACTG
AATCCCAGGG ATTTTGCCCT GCTCAAACGC GCCACCCTCG CCGAGCTCAA GCGCGGGGTG
TGCCTCAAGA CCGACTGGGG AAACGTCATC CCAACGTGGC ATATCGCGGC GGCCTCCGTT
GCTCTGCGCG AGCTGGGCGC CCCCATCGAC ATCCAGGTGA GCAGCGTGGA CTTCCTGTTT
CCGCACCTCG AGAACGTGCG CGAGATCGGT CATGCCCTCA CGGGAAAACC ATTCGCCAAT
GTCTGGATGC TGAGCGAGCG CATGTGGTCA GGCGCGGACG TCAAGCGGGA AGACGGGCTG
AGCGAGGAAA CCCCCATCCG CGAATTGAAC AAGCTGGGGT ATTCACCCAT CGAAGTCCGG
TACTGGTTGC TGAGCAACCA CTATCGAAAG CCGATCCACG TCACCCCGGA GAATATCGAC
AATGCCCGGC GCGGATACCA CCGCTTGAGA GAGTTCATCC ATCGCGTGCA GCACGCCCGG
ACGGCGTCTC AAGATCACAA GCTGCTGCCC GAGATGATCT ACGCCCTCGA GCAGGGGTTC
TTCGATGCGC TCGCCGATGA TCTGAACGTG CCCCGGGCCT TCGCATGCCT GTTTCGTTTC
ATCCGGCAGT TCAACCCGAT TCTGGACCGC GAGGAGTTCA GCGAAGCCCA ACGCCGCCAG
ATCACGGACG TGTTCTACAA GATCAATGGA ATCATGGGCA TTTTCGACCT GGAGCTGCAG
CCTTTGTCCG AGGACGACCA GGAATTGATC CACAGGCGTG AGAAAGCCCG AGGCTCAGGG
GAGTGGGATA CCGCGGATCG TATCAGGGAG ACGTTGCTCC AGCGTGGGCT GAAGGTGATC
GACACTCCTC TCGGGACCCG ATGGGAAAGA GTCGAACACT GA
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| Protein sequence | MKTVFSNVLE SIGNTPLIRI NRLNPNPAVT LYAKLEAKNP GGSIKDRTAL FMIESAERDG
LLTHEKIIIE ATSGNTGIGL AIVAAVKGYR LMLAMPETAS LERQKILKAL GAEILLTPGN
LGTDGAIEKV YSLVRENPDR YYMPDQFNNP ANPAAHHFGT GPEIFEQTEG KVNTVVVTLG
TTGTAMGILQ AMKERDPAIR VVGVEPYPGH RVQGLKNMKE SYVPGIFDRH ALDQIIHIKD
EDAFEMARRL AREEGIFTGM SSGAAMAIAV RVAEEMREGI VVAVLPDGGD RYLSTNLFTT
LLEPDFHFFN FLERKKVDFK PVVEGKVRIC VTGPPLDNPL TLGESRRFLL ADFLARFLTA
KSFSVEQVVQ VPDLDSRTIG GSLASRMPLS AYTRQQLDLI LEDLDRLAVK RAYRYPRSSE
HINAITEDTK TLVNKGLAYD KLRSVYFNLS GSKDYGALSR VNLKKIRIGT TVDLDAYEKL
NPRDFALLKR ATLAELKRGV CLKTDWGNVI PTWHIAAASV ALRELGAPID IQVSSVDFLF
PHLENVREIG HALTGKPFAN VWMLSERMWS GADVKREDGL SEETPIRELN KLGYSPIEVR
YWLLSNHYRK PIHVTPENID NARRGYHRLR EFIHRVQHAR TASQDHKLLP EMIYALEQGF
FDALADDLNV PRAFACLFRF IRQFNPILDR EEFSEAQRRQ ITDVFYKING IMGIFDLELQ
PLSEDDQELI HRREKARGSG EWDTADRIRE TLLQRGLKVI DTPLGTRWER VEH
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