Gene Sfum_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0454 
Symbol 
ID4461040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp548430 
End bp549071 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID639701210 
Producthypothetical protein 
Protein accessionYP_844589 
Protein GI116747902 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.62301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGACGG AAATGGTTTC GAATTTCGCG ATCCGGTGCC TTGAAACCAC CGGGTACCTT 
GGTGCCGCCT TTCTCATGGC GCTGGAGAGC ATGATCGCCC CCATCCCGAG CGAGGCGGTC
ATGCCTTTCG TGGGGTTCCT GGTGGCCGAC GGGAAATGGA ATCTCTGGAT TGCCGTACTC
GCCACCAGCG CCGGTTCCAT CATCGGCTCC CTTGCCTCTT ACCTGATGGG CTATCATGGA
GGCAAGCCAT TGGTGCTCAA GGTCGGGAAA TACCTGCTGC TCGATGCGCA CGACCTGGAG
AGGACGGAGT CGTTTTTCAA CCGGCGGAGC GGCACTCTGA CCATTTTTGT CAGCCGGTTC
GTTCCCGTCG TGAGGCACCT GATTTCGATT CCCGCAGGGA CCGGCAAAAT GCCGCTGGGT
CGCTTCCTGA TCGCCACCCT CATCGGCGCG ACCCTGTGGA ACTCCTTTCT GCTGGGTTGC
GGCATGGTCC TCCGCGAACA CTGGTCCGTC GTGCAGACTT ATTCGCACCA GGTGGATATC
GTGGTGGTTC TTGCGCTGCT GGCAGGCGCC GCGTGGTTTG TCAGGGCAAG AATCGGCGCC
AGGAGCCGGA AGGCGATGGC GTCTTCCTCG GAGGGGGAAT AG
 
Protein sequence
MLTEMVSNFA IRCLETTGYL GAAFLMALES MIAPIPSEAV MPFVGFLVAD GKWNLWIAVL 
ATSAGSIIGS LASYLMGYHG GKPLVLKVGK YLLLDAHDLE RTESFFNRRS GTLTIFVSRF
VPVVRHLISI PAGTGKMPLG RFLIATLIGA TLWNSFLLGC GMVLREHWSV VQTYSHQVDI
VVVLALLAGA AWFVRARIGA RSRKAMASSS EGE