Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0454 |
Symbol | |
ID | 4461040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 548430 |
End bp | 549071 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701210 |
Product | hypothetical protein |
Protein accession | YP_844589 |
Protein GI | 116747902 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.62301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTGACGG AAATGGTTTC GAATTTCGCG ATCCGGTGCC TTGAAACCAC CGGGTACCTT GGTGCCGCCT TTCTCATGGC GCTGGAGAGC ATGATCGCCC CCATCCCGAG CGAGGCGGTC ATGCCTTTCG TGGGGTTCCT GGTGGCCGAC GGGAAATGGA ATCTCTGGAT TGCCGTACTC GCCACCAGCG CCGGTTCCAT CATCGGCTCC CTTGCCTCTT ACCTGATGGG CTATCATGGA GGCAAGCCAT TGGTGCTCAA GGTCGGGAAA TACCTGCTGC TCGATGCGCA CGACCTGGAG AGGACGGAGT CGTTTTTCAA CCGGCGGAGC GGCACTCTGA CCATTTTTGT CAGCCGGTTC GTTCCCGTCG TGAGGCACCT GATTTCGATT CCCGCAGGGA CCGGCAAAAT GCCGCTGGGT CGCTTCCTGA TCGCCACCCT CATCGGCGCG ACCCTGTGGA ACTCCTTTCT GCTGGGTTGC GGCATGGTCC TCCGCGAACA CTGGTCCGTC GTGCAGACTT ATTCGCACCA GGTGGATATC GTGGTGGTTC TTGCGCTGCT GGCAGGCGCC GCGTGGTTTG TCAGGGCAAG AATCGGCGCC AGGAGCCGGA AGGCGATGGC GTCTTCCTCG GAGGGGGAAT AG
|
Protein sequence | MLTEMVSNFA IRCLETTGYL GAAFLMALES MIAPIPSEAV MPFVGFLVAD GKWNLWIAVL ATSAGSIIGS LASYLMGYHG GKPLVLKVGK YLLLDAHDLE RTESFFNRRS GTLTIFVSRF VPVVRHLISI PAGTGKMPLG RFLIATLIGA TLWNSFLLGC GMVLREHWSV VQTYSHQVDI VVVLALLAGA AWFVRARIGA RSRKAMASSS EGE
|
| |