Gene Sfum_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0452 
Symbol 
ID4461038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp546877 
End bp547611 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID639701208 
Productmethyltransferase type 12 
Protein accessionYP_844587 
Protein GI116747900 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.652795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGC TGGACACATT GATGGATCTC ATCCGGCAGA AGTATGAAGT CGAGGTGGTG 
CCCCTCAAGA TCGGGGACAG AACCCTTCGA CTCCTGCAAT TGACGGATTT CGAAGCATAC
ATCGAAAGAC TGGTGGATTC GGGCGGCGTG GGCATCATGG ATCTGCCCTT CTGGGCCAAG
GTCTGGGATT CGAGTTTTCT GCTCGCCTGG TTTCTCGGCA AGCAGCCCGT GGTGCCCGGT
CGGCGGCTGC TCGAGATAGG AGCGGGCATG GGAGTGGTCG GTCTCTATGC AGCTCTTTGC
GGACACCGGG TCACTCTCAG CGACATCAAC GAAGACGCGC TTCTTTTTGC CAGGGCCAAT
GCCCGGCTGA ACGGGCTGAC GGAAATGAAG ATCCTGAAGC TCGACTGGAA CGATCCCTCT
CCTTTCGAGC CCTACGATAT CGTTTTCGGG TCCGAAGTGA TCTACGACCG GAAGTCGTAT
CCTCTGCTGG TCCGGTTCCT GCGCAGGGCC GTCGCACCCG ACGGGATGAT CTTTCTGGCA
AAGAACCAGG GATTGCATGC TCCGAGGTTT TTCGAAGAGC TGACCAGGTA CTTCGAGTTC
AAGGAGAAAG TGCAGGAGGT TCGAAGCTGC GGAGAAGCTG AGAAGATATG TCTCTATGCC
ATACGCCGCA AGCGGAGTGT CCCCGAGGAA TCCGGGGTGG ATTCCGCTGC GTGCGCGGAC
GGGGGCGGAA CCTGA
 
Protein sequence
MDELDTLMDL IRQKYEVEVV PLKIGDRTLR LLQLTDFEAY IERLVDSGGV GIMDLPFWAK 
VWDSSFLLAW FLGKQPVVPG RRLLEIGAGM GVVGLYAALC GHRVTLSDIN EDALLFARAN
ARLNGLTEMK ILKLDWNDPS PFEPYDIVFG SEVIYDRKSY PLLVRFLRRA VAPDGMIFLA
KNQGLHAPRF FEELTRYFEF KEKVQEVRSC GEAEKICLYA IRRKRSVPEE SGVDSAACAD
GGGT