Gene Sfum_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0354 
Symbol 
ID4460871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp416091 
End bp417104 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID639701109 
Productradical SAM domain-containing protein 
Protein accessionYP_844489 
Protein GI116747802 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.898506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAGG CGATGTTCTA CCGAAAGCTC GATGGGAACG AGACCGCTTG CTTTCTTTGT 
CCCCACCATT GCCGCATCCT TCCTGGAAAG CGCGGCAAGT GCGCAGTCCG TGAAAATCGG
GACGGCAAGC TGTACAGCCT GGTTTACGGA AAGCTCATCG CGCTGCACAT CGATCCCATC
GAGAAGAAAC CGCTGTTCCA CTTCTGCCCG GGCACCACCA GTTTTTCCAT TGCCACGGCG
GGCTGCAACC TGCAATGTCG GTTCTGCCAG AACGCGGACA TCTCCCAGGC GCCCCGGGAT
CATCGGACCA TCTTCGGCGA AGACATACAG GCGGCGGTCG TTGTCGAGCG CGCCCGGCAG
CATGGGTGCG CAACGATTTC CTATACCTAT ACCGAGCCGA CCGTTTTCAT GGAGTACGCC
TTGGATACGG CCCGGCGCGC CCGCGCGGCG GGCCTCGGCA ACGTGTTCGT GAGCAACGGC
TTCATGACCG AGGAAGCGTT CGAGGCCGTC GCGCCCTTTC TGGACGCTGC GAACGTGGAC
CTCAAGGCCT TCAACGACGC GTTTTACCGG GAACAGTGCG GAGCCCGGCT CGATCCGGTC
CTCAAGACCC TCGAACGGAT GAAAAAGCGC GGGATCTGGC TGGAAGTCAC CACCCTGTTG
ATTCCGGGCC TCAATGACGG CGACGAGGAA TTGAAGTCGC TGGCGGGCTT CCTGGTCGAG
CTGGGTCCCG AGACCCCCTG GCATGTCAGC CGGTTCCACC CCGACTACCT GATGACCCAT
GTCCCCCCGA CTCCCGTCGA GACGCTTCGG CGGGCCCGCC GCATCGGGAT CGAGGCCGGG
CTGTGGTACG TCTATACGGG CAATATTCCC GGTGATGAGG GTGAGCACAC TTTCTGTCGG
AACTGCGGCC TCAAGCTTAT CGACCGCTTC GGCTTCACCA TCGGGCGCAA GCAGCTTTCG
CAGGGTGCGT GCGTCAACTG CGGGACGCTC CTGCACGGCG TTGGAATCAG ATGA
 
Protein sequence
MKEAMFYRKL DGNETACFLC PHHCRILPGK RGKCAVRENR DGKLYSLVYG KLIALHIDPI 
EKKPLFHFCP GTTSFSIATA GCNLQCRFCQ NADISQAPRD HRTIFGEDIQ AAVVVERARQ
HGCATISYTY TEPTVFMEYA LDTARRARAA GLGNVFVSNG FMTEEAFEAV APFLDAANVD
LKAFNDAFYR EQCGARLDPV LKTLERMKKR GIWLEVTTLL IPGLNDGDEE LKSLAGFLVE
LGPETPWHVS RFHPDYLMTH VPPTPVETLR RARRIGIEAG LWYVYTGNIP GDEGEHTFCR
NCGLKLIDRF GFTIGRKQLS QGACVNCGTL LHGVGIR