Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0353 |
Symbol | |
ID | 4460870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 415426 |
End bp | 416094 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639701108 |
Product | HhH-GPD family protein |
Protein accession | YP_844488 |
Protein GI | 116747801 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.822084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCG ACCGAAACGG GCTCATCCGG TTGATTTTCG ATCGCCTCCA CGGTTTCTTC GGCCCCCAGA ACTGGTGGCC GGCGGACACC CCCTTCGAGG TCATCGTGGG TGCGATCCTC ACTCAGAACA CCTCATGGAA GAACGTGGCG CGTGCCGTCG CAAACCTGCG GGATCATGGG CTCTTGTCTT TCGAGGCTTT GTGCGCAGTC CCGGAACCGC TTCTCGCCGA ATTGATCCGC TCTTCCGGTT ACTACAACCA GAAAGCCCGC AAATTGAAGG CCTTCTGCCG GCACGTTTGC GAAACAGGGC ACGCGGGCCT CGACGGATTT CTCGCCCAGG ATACCGACAC GCTGCGTTCC GAGTTGCTTC GCATCCGCGG CGTGGGTCCC GAAACCGCCG ACAGCATCGT GCTCTACGCC GCCCATAAGC CTTCTTTCGT GGTCGACACG TACACCCACC GGGTATTCTC CCGTCACGGA TGGGTGCAGG AGTCCCCGAG CTACGACGAG CTCAGGGGGT TTTTCATGGA TTGCCTCGAA CCGGATGTCG GTCTCTTCCA GGAGCTCCAT GCCCTGCTGG TGCGGACCGG ACACCTGTTC TGCCGGAAAA CCCCGCGTTG CGGCGGTTGC CCGCTCGAGG GTCTCCGTGC GGGAACGGCG GCCGGATGA
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Protein sequence | MMTDRNGLIR LIFDRLHGFF GPQNWWPADT PFEVIVGAIL TQNTSWKNVA RAVANLRDHG LLSFEALCAV PEPLLAELIR SSGYYNQKAR KLKAFCRHVC ETGHAGLDGF LAQDTDTLRS ELLRIRGVGP ETADSIVLYA AHKPSFVVDT YTHRVFSRHG WVQESPSYDE LRGFFMDCLE PDVGLFQELH ALLVRTGHLF CRKTPRCGGC PLEGLRAGTA AG
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