Gene Sfum_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0339 
Symbol 
ID4460700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp399494 
End bp400816 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content60% 
IMG OID639701094 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_844474 
Protein GI116747787 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.733375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG TCCTGATGCT TTCGAGGCTG CAATTTGCCG CTGCGACCTT TTTTCACTTT 
CTGTTCGTCC CTCTTACGCT GGGGCTTTCC ATCCTGATCG CCGTCATGGA AACCATTTAC
GTTCGCACCG GCGACGAGGA ATACAGAAAC ATGGCGCGTT TCTGGGGAAA GATTTTCCTC
ATCAATTTCG CCATCGGCGT CGTCACGGGC ATCACGCTGG AATTCCAGTT CGGCACCAAC
TGGTCGCGGT ATTCACGCTA TGTGGGCGAT ATCTTCGGCT CGCTGCTGGC CATCGAGGCA
ACGGTGGCTT TCTTCCTGGA ATCGACTTTC ATCGCCGTGT GGGCGCTGGG ATGGAAGCGG
CTGTCGCCTA AGGCTCATGC GGCGACCATC TGGCTGGTTG CCGTCGCCTC CAACGTGTCG
GCCTTCTGGA TCCTGATCGC CAATGCCTGG ATGCAGCACC CGGTCGGTTA CACGATCCGC
AACGGCAGGG CTGAATTGAC CGACTTTACG GCGATCGTCA CGCAGTCCTT CGCACTCAAC
GAAATCGTGC ACACCCTGGG CGCGGCCTAC ATCCTCACCG CGTTTTTCAT GATGGGAATC
AGCGCTTATC ATCTGCTGCG CAAGCAGCAC GTCGCGTTTT TCACCAGGTC GTTTCGCATG
GCGGTCACCT TCGGCTTGAT TTTCGCCGTC GTCGAGGTGG TTCAGGGACA TATGCACGGG
GCGGAGGTGG CCAGGGTGCA ACCCGCCAAG CTTGCCGCCA TGGAGGCGCT CTGGGACACC
ACCGCGCAAG CGCCCCAACA CCTTTTCCTC ATCCCGGACG AGAAGAATGA AACCAATCTC
GCAGTGTTCG GCACCATTCC GGGCGCTCTG AGCATGCTGG CCTATCACGA TCCCAAGGCC
ACGGTGAAGG GCCTCAAAGA CTTTCCTCCC GAGGAACGGC CGCCGGTCAC GCTGCCCTTC
GCGGCGTTCC GGATCATGAT CTCTCTGGGC TTCCTGTTTC TTTTTCTCAC CGCCTACGGC
TGGATACGGC GAGACCGGCT GATGGAAAGT CCCCGGTACC TCAAGCTCAT GCTGTTCGCC
GTGCCTCTTC CCTACCTGGC CATCCAGGCC GGCTGGGCGC TCGCCGAGGT AGGACGCCAG
CCCTGGGTGG TTTACGGGGT GATGAAAACC GCCGACGCCG TTTCCAAACT GAGCGCGTCG
CAGGTCTGGG CCTCATTCCT CGGGTTCATC GTGGTGTACA CGTTGCTGGG AATTGCAGCC
TTCACCCTCA TTGTCTCCAC CGCCCGCAAG GGGCCCGAAA CCCATCCGGC CACGGCGCAG
TAA
 
Protein sequence
MMDVLMLSRL QFAAATFFHF LFVPLTLGLS ILIAVMETIY VRTGDEEYRN MARFWGKIFL 
INFAIGVVTG ITLEFQFGTN WSRYSRYVGD IFGSLLAIEA TVAFFLESTF IAVWALGWKR
LSPKAHAATI WLVAVASNVS AFWILIANAW MQHPVGYTIR NGRAELTDFT AIVTQSFALN
EIVHTLGAAY ILTAFFMMGI SAYHLLRKQH VAFFTRSFRM AVTFGLIFAV VEVVQGHMHG
AEVARVQPAK LAAMEALWDT TAQAPQHLFL IPDEKNETNL AVFGTIPGAL SMLAYHDPKA
TVKGLKDFPP EERPPVTLPF AAFRIMISLG FLFLFLTAYG WIRRDRLMES PRYLKLMLFA
VPLPYLAIQA GWALAEVGRQ PWVVYGVMKT ADAVSKLSAS QVWASFLGFI VVYTLLGIAA
FTLIVSTARK GPETHPATAQ