| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0312 |
|---|
| Symbol | |
|---|
| ID | 4461663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 374591 |
|---|
| End bp | 375571 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701067 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_844448 |
|---|
| Protein GI | 116747761 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.950676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.481983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA TTCGTTGGTC GACGCTTGTC ATCCTTTTAT TACTTGCCGT TTTTCCCCTC
GTGATCCAGT CCGATTACTA CCGGCACATC CTCATCATTG CGCTCATGTG GGTGGTCATC
GGATCATCAT GGAATCTGCT GTCCGGTTAT ACGGGACAGG TCTCGTTCGG CCATGCCATT
TTTTTCGGCA TCGGCGCCTA CACGGCGGGG CTGTGCACGA CCCAGCTCGA CATATCGGCA
TGGTACGGCA TGCTGCTGGG AGGACCGGTC GCCCTTCTCA TCGGGCTCGT CATCGGATGG
ATCTGTTTCC GTCTGCGCGG CCCTTACTTT GCCCTCGCGA CCATCGCGGT GGGCGAGATC
TTCCGGCTGG TCGCCACGGA GTGGGTCGAC TTCACGGAGG GCATGCAGGG CATCCTCATC
ATCCAGACAT TCCGGAGCAA GATTCCTTAC TATTACCTGG CCCTCGGTCT GGCAGCCGCA
TGCATTTATT CCATCCACAC GGTCATGAAT TCAAAGTGGG GTTACTACTT CCTGGCCATC
CGGGAAGACC AGGACGCCGC CGAAGCCCTG GGGATCAGCA GTTTTCGTTA CAAGAGCCTC
TCCCTTATGA TCAGCGCCTT TTTCACCGGT CTTGCCGGTG CCTTTTACAT GAACTACATG
GCGTTCATCG ACCCTCAGGT GGTCTTTTCG CTCCACTTCA TCTCCATCAT GGCCATCCTC
GTGGGAATCA TCGGCGGCGT GGGAACCCTC TGGGGCCCGC CGACGGGTGC CTTTATCATG
GTCCTGCTCC AGGAGACATT CCGGAGCGCC TTTTTCGGCA TGCTTCCGAA GTGGGTCAGT
GAGGCCCACG TCCTGGTTTT CGGATTGCTG GTCATCTTCG TCATCCGCTA CATGGCCAAC
GGCATTGTGG GAGACTGGGG CAAGATCCGC CAGGTTTTCT CCGGCCGGAA AGCATCACCT
TCTGCAGGAA GTGGAAACTG A
|
|---|
| Protein sequence | MKSIRWSTLV ILLLLAVFPL VIQSDYYRHI LIIALMWVVI GSSWNLLSGY TGQVSFGHAI
FFGIGAYTAG LCTTQLDISA WYGMLLGGPV ALLIGLVIGW ICFRLRGPYF ALATIAVGEI
FRLVATEWVD FTEGMQGILI IQTFRSKIPY YYLALGLAAA CIYSIHTVMN SKWGYYFLAI
REDQDAAEAL GISSFRYKSL SLMISAFFTG LAGAFYMNYM AFIDPQVVFS LHFISIMAIL
VGIIGGVGTL WGPPTGAFIM VLLQETFRSA FFGMLPKWVS EAHVLVFGLL VIFVIRYMAN
GIVGDWGKIR QVFSGRKASP SAGSGN
|
|---|
| |