| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0306 |
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| Symbol | |
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| ID | 4461657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 368569 |
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| End bp | 370080 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701061 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_844442 |
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| Protein GI | 116747755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.168492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA AAATATTCAT CTTCGATACC ACATTGAGAG ACGGTGAACA GGTCCCCGGA
GCCAAGCTCA ACAAGCGCCA GAAGATTGAA ATCGCACAGC AGCTGGCAGT GCTCGGGGTT
GACGTCATCG AAGCGGGCTT CCCGTGTTCT TCTCCCGATG ATCTCGCCGC GGTCAAGGCC
ATCTCTGAAA ACGTGAAGGG GCCGGTGATT ACGGGGCTGG CCCGCGCCGT GGTGGAAGAC
ATAGACATCG CCTGGGAGGC GGTGCGCAAT GCGGAGCGTC CCCGCATTCA CGTGTTCCTG
GGTTCCTCGG ACATCCATCT TCAGAAAAAA CTGCGGCAGG ATCGAGCCAC GGCCCTGCGG
CAGGCCGTGG ACGCGGTGAA GTACGCCAAG CGATTCTGCG AGGACGTGGA ATACTCGACG
GAAGACGCCT CCCGCACGGA TTTCGAATAC CTGTGCCGGG TCCTTGACGC CGTCATCAAG
GAGGGCGCCA CCGTGGTGAA TGTTCCCGAC ACGGTCGGCT ATGCCGTGCC GGACGAATTC
GGGGAAATCA TCCGCAAGCT GCGCGAGAAG GTTCCCGGCC TCGACAAGGT GACCCTGAGC
GTGCATTGCC ACAACGATCT CGGGCTGGCC GTGGCCAACA GCCTGGCCGC CGTCAGCAAC
GGCGCCAACC AGATCGAATG CACGATCAAC GGTGTCGGAG AACGCGCCGG CAATGCTTCC
CTCGAGGAAC TCGTCATGGT GCTCAAGACG CGCCACGCAA CGTTTGACGC TCACACCGAC
GTCAAAAGCC AGGAAATCTA CCGCACCAGT CGCATGGTCA GCCGCCTCAT GAACGTGCCG
GTCCAACCCA ACAAGGCCAT CGTCGGGGCC AATGCGTTCG CCCATTCGTC GGGAATCCAC
CAGGACGGCA TCCTGAAAGA TCGCAGCACC TATGAGATCA TGAAGCCCGA AGACGTGGGC
ATCCGCCAGC ACAAGATCGT CCTGACCGCC AGGTCGGGAC GCGCCGCCCT GCGACACCGC
CTCACAGAGC TGGGTTATAC GATCTTACCG GAAGTGTTCG ACCGGGTATA CAACCGCTTC
ATCAACGTGG CGGACCGTAA GAAGGAGATC GGCAGCGAGG ATCTGCATTC CATCGTGGAA
ATCGAACTGA CCCGGGTGCC GGAAACCTAC ACCTTCCACA GCCTCCAGCT CATGAGCGGC
AGCAGCATGG TCCCGCTCGC TTCGGTCACC CTGACCAGGG AGGGAGTGAA AATCACCGAC
GCCGCCACAG GCAACGGCCC GGTCGATGCC GTCTTCCACG GTATCGAACG GATCGTGGGC
GTCAGCGGCA AGCTTCGCGA CTACGATCTG AAAGCGGTCA CCATGGGTCG GGACGCCCTG
GGCGAGGCGA TGGTGAGGGT TGAAATCGAA GGGACGGTCT ATTCCGGCAC CGGTGCCAGC
CCAGACGTCA TCGAAGCCAG TGCCCGGGCC TATCTGAACG CGTTCAACCG GTATTTCGCC
AACTCACACT GA
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| Protein sequence | MSRKIFIFDT TLRDGEQVPG AKLNKRQKIE IAQQLAVLGV DVIEAGFPCS SPDDLAAVKA
ISENVKGPVI TGLARAVVED IDIAWEAVRN AERPRIHVFL GSSDIHLQKK LRQDRATALR
QAVDAVKYAK RFCEDVEYST EDASRTDFEY LCRVLDAVIK EGATVVNVPD TVGYAVPDEF
GEIIRKLREK VPGLDKVTLS VHCHNDLGLA VANSLAAVSN GANQIECTIN GVGERAGNAS
LEELVMVLKT RHATFDAHTD VKSQEIYRTS RMVSRLMNVP VQPNKAIVGA NAFAHSSGIH
QDGILKDRST YEIMKPEDVG IRQHKIVLTA RSGRAALRHR LTELGYTILP EVFDRVYNRF
INVADRKKEI GSEDLHSIVE IELTRVPETY TFHSLQLMSG SSMVPLASVT LTREGVKITD
AATGNGPVDA VFHGIERIVG VSGKLRDYDL KAVTMGRDAL GEAMVRVEIE GTVYSGTGAS
PDVIEASARA YLNAFNRYFA NSH
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