Gene Sfum_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0292 
Symbol 
ID4460894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp350070 
End bp351245 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content58% 
IMG OID639701047 
Producthypothetical protein 
Protein accessionYP_844428 
Protein GI116747741 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GATTCCTGGA GACGCTGAAC GGGACGCCCC GCTTCCCGGG GTATCGTCCT 
TTCCTTCTCG TTGTGCTGTT CTATTCCCTT TATCTCACTT ACCTGATACT CCACCCGTTC
CTGGACACGC TCATCATGTC CATCGTGATT TCCTCGTTGT TCTATCCGCT GCAAACCTGG
CTGGTGAAAA AGTACCGCGG CCGGCAGACC CTTGCCGCCC TGACCATCGT GTTCATCATC
ACGTTCGTCA TCGCCATACC GATATTTTTC TTCGCATCGA CGCTCATCGC CCAGGGAGTG
CAGACCATCA ACCAGATCAA CGATTGGCTT CGCGCCGGCA ATATCCAGAA GCTGGCACAA
GATCCACGGG TCATGGAGTT GATGGACTGG GTTCAGACTC GACTCTCGTT CCTGGACCTG
AAGAAACTCG ACGTATCCAG CAATATCATG GCACTGAGCA AGAACTTCGG TCAGTTCGTC
CTGAGCCGTG CCGCGACCAT ACTGGGCAAT GTCGCCAGCC TGGTCACCCA CTTTTTCATC
CTCGTGTTCA TTTCCTTCTA CCTGGTGCGC GACGGGGCCG CGATGCTCGA TGCCGCGAGG
GGGTTCTCCC CGTTGCGCAA GGACCAGGAG GACCGGTTGC TCGGCGGCAT CCGGGTGGTG
GCCCGTTCCG TGCTCATGGG CGCCTTCATG ACCGCGCTGT GCCAGGGGCT GATCGGGGGT
ATCGGAGTTG CCCTGATCGG TTTGCCGGGA CTTTTCTGGG GCACGGTGAT GGGCTTCGCC
TCTTTCATTC CCATCGTCGG AACCGCCTTG GTCTGGGTTC CCATGGCAGC TTACCTCGTG
TTGCTCGGAA CCTGGAAATC GGCCCTCTTC CTCGCCATCT GGTGCATCGT CCTGGTGGGC
AGCATCGACA ACTTCGTAAG GCCTTACCTG ATGCGGGGGC AATCGAACCT GTCTCCGTTC
TACATCTTTC TGTCGATCAT CGGTGCCGTC CAGTACTTCG GGCTCACCGG CATTCTCTAC
GGTCCGCTGA TCGTGTCCTT TGCGATGATC ATGCTCTATC TCTACGGTGC GGAATACCGG
GAGGATCTGG CGGAAAGCAA GAGCGGCACG CATGCGGTTG AGGAAAAGGC GCAGGAGACG
CCGGGCGGGG AGCTTCCAGC CTCGACGGGA GAATAG
 
Protein sequence
MSKRFLETLN GTPRFPGYRP FLLVVLFYSL YLTYLILHPF LDTLIMSIVI SSLFYPLQTW 
LVKKYRGRQT LAALTIVFII TFVIAIPIFF FASTLIAQGV QTINQINDWL RAGNIQKLAQ
DPRVMELMDW VQTRLSFLDL KKLDVSSNIM ALSKNFGQFV LSRAATILGN VASLVTHFFI
LVFISFYLVR DGAAMLDAAR GFSPLRKDQE DRLLGGIRVV ARSVLMGAFM TALCQGLIGG
IGVALIGLPG LFWGTVMGFA SFIPIVGTAL VWVPMAAYLV LLGTWKSALF LAIWCIVLVG
SIDNFVRPYL MRGQSNLSPF YIFLSIIGAV QYFGLTGILY GPLIVSFAMI MLYLYGAEYR
EDLAESKSGT HAVEEKAQET PGGELPASTG E