Gene Sfum_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0246 
Symbol 
ID4461322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp287176 
End bp288366 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content60% 
IMG OID639701001 
Producthypothetical protein 
Protein accessionYP_844382 
Protein GI116747695 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.742639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAC CCTCGGGGCG AGAGGGCTTA ATCCTTTGTC GTGAGCCTGC GGCTCATGGA 
ATATGTGAAA AGTGTAGGTT TGACCCCATG ACGAAAGTGA TCCTGGAACG AGCGTCGTAC
GAATACGGCA GTCTCAGAAC CCACATTTTT TCGATGTTGG AATCATGCGG AATTTCAGTG
GGCGAGGGGC GCAAAGTGCT GCTCAAGCCG AACCTGCTCG CGCCCGCATC CCCGGAAAAA
GCGATGTTGA CGCACCCCCT CGTGGTCAGG GTCGCGGCGG AGTACGTGCT GGAAAAGGGA
GGCGTCGTTC AATTGTCGGA CAGCCCCGCG ATGGGCGGTT TCGACAAAGT CCTGAGGGAA
AGCGGCATTA AGGATGCCCT GGCGGGTCTC CCCGTGGAGT TCAAGGAATT TCGGGACAGT
GTCCCCGTGG AGGTCGGTCC CCCCTTCAAT CGACTGGAAC TTGCGGCGGA CGCCCTCGAT
GCGGACGTCC TGATCAATCT TCCCAAGCTC AAAACGCACG GTCAGATGCT TCTCACTCTC
GGCGTGAAGA ACCTCTTCGG ATGCGTCGTC GGTTTGAGAA AACCCCAGTG GCACCTTCGG
ACGGGAGTCG ACCGGGAGAT GTTTGCCGCC CTGCTGGTGA CGATTTACAG GAAACTCATG
CCTTCCGTCA CGATTTTGGA CGGCATCCTG GCCATGGAGG GCAACGGCCC GGGGCGTGGC
GGAAAACCGA AGGAACTGGG GTTGTTGATG GCGAGCACGG ATGCGATTGC CGTCGACATG
ACGGTGTGTG AAATGCTGGG CCTCCCCGCG GACGCATTGT TCACCAACGC CGCCGCCGCG
CGGGCGGGCA TCGCTCCGGC GCGGATCGAC GTGCGGGGTG ACAAGTTCCG CATTCAGGGC
TTCCAGCTTC CGAAAATGAC CCCCCTGGTC TTCGGGCCGA AGTTCACTCA TAAACTCATG
AGAAAATTCC TCGTCCAAAG ACCCCAGGCG GATCCGCTCC TGTGCAAGGC ATGCGGGGAC
TGCCGCAAGT ACTGCCCGGC CGGCGCGATC ACCCAGGCCG GCTCGAAAAT CGAATTCGAT
TACGATCGCT GCATCCGGTG CTACTGCTGC ATCGAAGTGT GCCCGCACGG AGCGCTCCGA
GCGGTGGAGC CCTATCCCGG GCGCCTGTTC AACCGGATCA TACGGCGCTG A
 
Protein sequence
MRIPSGREGL ILCREPAAHG ICEKCRFDPM TKVILERASY EYGSLRTHIF SMLESCGISV 
GEGRKVLLKP NLLAPASPEK AMLTHPLVVR VAAEYVLEKG GVVQLSDSPA MGGFDKVLRE
SGIKDALAGL PVEFKEFRDS VPVEVGPPFN RLELAADALD ADVLINLPKL KTHGQMLLTL
GVKNLFGCVV GLRKPQWHLR TGVDREMFAA LLVTIYRKLM PSVTILDGIL AMEGNGPGRG
GKPKELGLLM ASTDAIAVDM TVCEMLGLPA DALFTNAAAA RAGIAPARID VRGDKFRIQG
FQLPKMTPLV FGPKFTHKLM RKFLVQRPQA DPLLCKACGD CRKYCPAGAI TQAGSKIEFD
YDRCIRCYCC IEVCPHGALR AVEPYPGRLF NRIIRR