Gene Sfum_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0236 
Symbol 
ID4461312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp276536 
End bp277189 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content55% 
IMG OID639700991 
Producthypothetical protein 
Protein accessionYP_844372 
Protein GI116747685 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000188385 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.437472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC CGTTTGATCA CTACTGGCAA CTCAGATTGA GCGACCTCAA GGAGACTCTG 
GAGGCCAACA ATTTTGAGGT TTTTCTGGCC GACAACAAGG AACAGGCCTG CAAGCTGGTG
CTGGAACGAA TCATCCCGGG AATCGGGGCG AAGTCGGTTT CCTGGGGAGG ATCGATGACG
TTCGTTGCCA CGGGATTGTA CGAAAAGGTA AAGGCTTTGC CCGGGCTTGA AGTGATTGAC
ACGTACGACC GTTCGATTCC ACGGGAAGAG GCGACGGAAA GGCGCAGACG GGCGCTGCTG
GTGGATCTTT ACATCACCGG GACAAACGCC GTGACGGAAA CCGGAAAACT GGTGAACCTC
GATATGACCG GCAACCGCGT GGCATCGATC ATCTTCGGGC CCAGGAACGT GATTCTCCTG
ATCGGCAGGA ACAAGGTGGT TCCGGACCTG GAAGACGCGA TGCTTCGCGT CAAGAATTTC
ACTGCACCCG TTAACGCCAT GCGGCTGGAT ATGCAGACAC CCTGCGTCAG CACGTCGTTT
TGCGAGGAGT GCAAGAGCCC ATCCAGGATC TGCAATACCT GGACGATCAC GGAAAAATCG
TTTCCCAAGG GGCGGATCAA GATCGTCCTG ATCAATGAAG ACCTTGGAAT CTAG
 
Protein sequence
MDKPFDHYWQ LRLSDLKETL EANNFEVFLA DNKEQACKLV LERIIPGIGA KSVSWGGSMT 
FVATGLYEKV KALPGLEVID TYDRSIPREE ATERRRRALL VDLYITGTNA VTETGKLVNL
DMTGNRVASI IFGPRNVILL IGRNKVVPDL EDAMLRVKNF TAPVNAMRLD MQTPCVSTSF
CEECKSPSRI CNTWTITEKS FPKGRIKIVL INEDLGI