Gene Sfum_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0234 
Symbol 
ID4461310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp275413 
End bp275958 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID639700989 
ProductMucR family transcriptional regulator 
Protein accessionYP_844370 
Protein GI116747683 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000960641 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.448103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGA AACTTTTGGA AATCACGGCG GAAATTGTGC AAGCTCAGGC GACGGTTGGC 
AAGATGTCTC CAGAGGAGAT CGAGCTTACG CTGGTGAGGA CGTTTGCCAC GCTGCAACGA
ATGCAGACGG CGGAGGATGG GGGCAAACCG CTGGACCCCG GCGCACCGTG CGAGGATTCC
CGACTGGAGG ACAGGACCGG GGACAAGGGG GGGCCCATGG ATTCGATCCA GGAGAACAAG
GTCGTGTGCC TCGAGTGCGG GGTGGAAATG AGGCAACTCA CCGCCAAGCA CCTTGGATCG
CACAACCTGA ACCCGCGCGA ATACAAACGA AAATGGGGCC TGCCCCTCAA GCAGTCCCTT
TCCGCAAAAT CGCTGTCGAA GGCCCGAAGC AAGGCCGCCA GGAAGAGAGG GCTGCCCGCC
AATCTGGTCA AATTCCAGGA GGAACGGAAG CGCAAGAAGG CGGAAGCCTC CCGGGCAGCA
GCGCCACAGG GGCAGAGACC GGGGGAAGGG AAGAAGACGG GAGGTCCCCC GAAGCCGGTT
GAATGA
 
Protein sequence
MSKKLLEITA EIVQAQATVG KMSPEEIELT LVRTFATLQR MQTAEDGGKP LDPGAPCEDS 
RLEDRTGDKG GPMDSIQENK VVCLECGVEM RQLTAKHLGS HNLNPREYKR KWGLPLKQSL
SAKSLSKARS KAARKRGLPA NLVKFQEERK RKKAEASRAA APQGQRPGEG KKTGGPPKPV
E