| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0208 |
|---|
| Symbol | |
|---|
| ID | 4461471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 241428 |
|---|
| End bp | 242948 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639700962 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_844344 |
|---|
| Protein GI | 116747657 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.259485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTCGCA CACTGAACCA ACAATCAACA GCAACGGACT GGCTTATGAC TTCCATGGAA
ATGGCCCATT TTCCCATCCT GTCGACGATT CTGCTGTCGA CGGTGCTCGG TTTGCTGGTG
ATCCTGTTCA TCCCGGCAGA CCGTCCCAAA CTGATCAAGC AAGTGAGCCT GGGGTTCGCG
GGGCTGGGAT TGGTGCTGTG CCTCTGGCTC TACCAGGCCT ATGACTTGCA AAAAGGCGGC
CTGCAATTCG TCGAGCGCTT CCTCTGGGTG GAAAGCCTGG GCATTTACTA CTTCAACGCC
GTGGACGGAA TCAACCTGCC GATGTTGCTC CTGACCGCCG TGGTCCTCTT CACGGGAGTC
TGGACCATGT GGGACCTGGA ACTGCGCGTC AAGGAGTTTT TCGCCCTGGT CTTTCTCCTG
GTGGCCGGAG TCTACGGCGT CTTCATGTCC ATGGACCTGT TCTGGATTTT CGTCTGGTAT
GACGTTTCGC TCTTTCCCAT GTATCCCCTG ATCGCCATCT GGGGGAGCAC TCGCAAAGAA
TACGGCGCCA TGAAGCTCAC CCTCTACCTG CTCGCGGGCA GCGCTCTGAT CCTGCCCGGC
ATCCTGTACC TGTGGGCGCA GGCCGGGGGA GTCACGTTCG ATCTGTTCGA GCTGCAGAAA
ATAGGCTTCA GCCCGTTCGC GCAGAAGCTC GCCTTCATCT TCTTCTATAT CGGCTTCGGA
ATTCTCGCCG CCGTCTGGCC GCTCCATACC TGGTCTCCGG TTGGTCACGT GGCGGCTCCC
ACGGCGGTGA GCATGATCCA TGCCGGCGTT CTGATGAAGC TGGGAGCCTA CGGGATCCTT
CGGCTGGGCA TGACGCTGTG TCCCGAGGGC CTCGCGTACT GGGCGGATCT CATGGCCCTG
CTCGGGACGG TGGGAATCGT GTACGGTGCC TTCGTCGGCC TGGCCCAAAC CGACCTCAAG
TATGTCATCG GCTATTCGAG CGTGTCGCAC ATGGGCATGG TCGGGCTGGG GCTTTCCACC
ATGACGGTCA ACGGCATCAA CGGAGCCGTT TTTCAGATGT TTGCCCACGG CGTGATGACG
GCGCTCTTCT TCTCCGCCGT CGGCTATATC TACGATCGGA CGCACACCAA GATGATCCCC
GATTTGGGCG GTTTGTCCAG GACCATGCCC GTGGCTTCCG CCTTCTTTAT CGTGGCGGCC
TTCTCCGGCA TCGGGGTTCC CTGCATGGCC AGCTTCTGGG CGGAGCTGCT GGTGTTTCTG
TCCGCGGTGA AAACCTACCC GGTCCGCGGC ATACTTGCGG TGTTCGGCCT GGTGGTGAGC
GCCCTGTTCA TGCTCCGCGT GGTGCAAAGG ACGTTCTACG GGGAAAGGAA CGAGCGTTGG
GCTCACATCC CGGATGTTCC GCTGTTCCTG GCCACGCCCA GGATCATCCT GGTGAGTATC
ATCATCTTCT TCGGGATTTT CCCCAAACTC ATGCTGGACG TCATTCAGAG TGCGGTGATC
CCGTTTGTCG GCAGTCTGTA G
|
|---|
| Protein sequence | MFRTLNQQST ATDWLMTSME MAHFPILSTI LLSTVLGLLV ILFIPADRPK LIKQVSLGFA
GLGLVLCLWL YQAYDLQKGG LQFVERFLWV ESLGIYYFNA VDGINLPMLL LTAVVLFTGV
WTMWDLELRV KEFFALVFLL VAGVYGVFMS MDLFWIFVWY DVSLFPMYPL IAIWGSTRKE
YGAMKLTLYL LAGSALILPG ILYLWAQAGG VTFDLFELQK IGFSPFAQKL AFIFFYIGFG
ILAAVWPLHT WSPVGHVAAP TAVSMIHAGV LMKLGAYGIL RLGMTLCPEG LAYWADLMAL
LGTVGIVYGA FVGLAQTDLK YVIGYSSVSH MGMVGLGLST MTVNGINGAV FQMFAHGVMT
ALFFSAVGYI YDRTHTKMIP DLGGLSRTMP VASAFFIVAA FSGIGVPCMA SFWAELLVFL
SAVKTYPVRG ILAVFGLVVS ALFMLRVVQR TFYGERNERW AHIPDVPLFL ATPRIILVSI
IIFFGIFPKL MLDVIQSAVI PFVGSL
|
|---|
| |