Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0188 |
Symbol | |
ID | 4461538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 222668 |
End bp | 223750 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639700943 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_844325 |
Protein GI | 116747638 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.258028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAATCA TTCCGCGCTA TGTTCTGAGG CATTTTCTGC CCGTATTCAT GTTGGCGCTC TTCACTTTCA CGAGCCTGTA CCTGATCGTG GATTTCTTTG AGAACATGGA GCAGTTCATA GAGAAGCGGG TCCCTGCGGC GGACACCATC GCCTACTTTC TGAACAAGAC CCCTTCAGTG GCCGCGCAGG GAATTCCCAT GGCCGCCCTG CTCGGAGCAC TGATCACCCT GGGCCTGTTG AAACGCAACC GTGAGCTGAT CGCCCTCGAG GCCGCCGGGG TCAAGACCGT CACCTACGTC ACTCCCATCG TTGCGGCCGC TTTCTTCATT GCCGCCGTCC ACCTGGTTCT CGGCGAGACT GTTTCGCGTT CGATGAACCA GGTGTCCACG AAGATATGGA ACGAGCAGGT CCAGCGCCGC AAAGGCCATT TTTCCTGGGG AGTCGAGAAC GTCTGGTATC ACGGCCAGAA TGTGATCTAC CAGGTCCGTT TCTATGACAA GCGGACGCAG ACCCTGGAGA AAGTGTCCCT GTTCTTCCTC GACCCCTCGT TCAGACTGGT TCAACGCCTG GATGCCAGGC GATTCCGCTG GGACGGCGCC AGGTGGCAGG CCGAGCAGGG GCTTTTCCTG AAATTCTCCG AATCCGGCAC GGAACAGGAG ACATTCGACC AGCGGGCATT CACGCTACAG GAGACCCCCG CGGATTTTTC CGGCCTGGAA ACGATCCCGG AGGAATTGGA CTGGTTGGAT CTCTACCGGT ATGCTGAAAA AATCCGTCAG GAGGGGTACA ATTCGCTGCC CTATATAATC GAGCTGCACC TGAGGGTCGC CTTCCCCCTG AGCGCGATTG TCCTGGCGAT ACTCGGCATC ATCATCGCCC TGCGGCAGAG CATGCACGGA GGGATTGCCC TGGGGGTGGG GATCGGCCTG CTGGTTGGTT CCTCGTATTT TGTCGTGCAG CAGCTGGGGT GTGCGTTGGC CGGCGCGGGG GCACTTCCGC CGGTCGTGGG CGTGTGGGCG GCAAACGTGA TCTTTCTGGC AGCCGCCGTC TACCTCTGGA TTTCGAACCC GTCCGGCGGC TGA
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Protein sequence | MRIIPRYVLR HFLPVFMLAL FTFTSLYLIV DFFENMEQFI EKRVPAADTI AYFLNKTPSV AAQGIPMAAL LGALITLGLL KRNRELIALE AAGVKTVTYV TPIVAAAFFI AAVHLVLGET VSRSMNQVST KIWNEQVQRR KGHFSWGVEN VWYHGQNVIY QVRFYDKRTQ TLEKVSLFFL DPSFRLVQRL DARRFRWDGA RWQAEQGLFL KFSESGTEQE TFDQRAFTLQ ETPADFSGLE TIPEELDWLD LYRYAEKIRQ EGYNSLPYII ELHLRVAFPL SAIVLAILGI IIALRQSMHG GIALGVGIGL LVGSSYFVVQ QLGCALAGAG ALPPVVGVWA ANVIFLAAAV YLWISNPSGG
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