Gene Sfum_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0188 
Symbol 
ID4461538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp222668 
End bp223750 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID639700943 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_844325 
Protein GI116747638 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.258028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATCA TTCCGCGCTA TGTTCTGAGG CATTTTCTGC CCGTATTCAT GTTGGCGCTC 
TTCACTTTCA CGAGCCTGTA CCTGATCGTG GATTTCTTTG AGAACATGGA GCAGTTCATA
GAGAAGCGGG TCCCTGCGGC GGACACCATC GCCTACTTTC TGAACAAGAC CCCTTCAGTG
GCCGCGCAGG GAATTCCCAT GGCCGCCCTG CTCGGAGCAC TGATCACCCT GGGCCTGTTG
AAACGCAACC GTGAGCTGAT CGCCCTCGAG GCCGCCGGGG TCAAGACCGT CACCTACGTC
ACTCCCATCG TTGCGGCCGC TTTCTTCATT GCCGCCGTCC ACCTGGTTCT CGGCGAGACT
GTTTCGCGTT CGATGAACCA GGTGTCCACG AAGATATGGA ACGAGCAGGT CCAGCGCCGC
AAAGGCCATT TTTCCTGGGG AGTCGAGAAC GTCTGGTATC ACGGCCAGAA TGTGATCTAC
CAGGTCCGTT TCTATGACAA GCGGACGCAG ACCCTGGAGA AAGTGTCCCT GTTCTTCCTC
GACCCCTCGT TCAGACTGGT TCAACGCCTG GATGCCAGGC GATTCCGCTG GGACGGCGCC
AGGTGGCAGG CCGAGCAGGG GCTTTTCCTG AAATTCTCCG AATCCGGCAC GGAACAGGAG
ACATTCGACC AGCGGGCATT CACGCTACAG GAGACCCCCG CGGATTTTTC CGGCCTGGAA
ACGATCCCGG AGGAATTGGA CTGGTTGGAT CTCTACCGGT ATGCTGAAAA AATCCGTCAG
GAGGGGTACA ATTCGCTGCC CTATATAATC GAGCTGCACC TGAGGGTCGC CTTCCCCCTG
AGCGCGATTG TCCTGGCGAT ACTCGGCATC ATCATCGCCC TGCGGCAGAG CATGCACGGA
GGGATTGCCC TGGGGGTGGG GATCGGCCTG CTGGTTGGTT CCTCGTATTT TGTCGTGCAG
CAGCTGGGGT GTGCGTTGGC CGGCGCGGGG GCACTTCCGC CGGTCGTGGG CGTGTGGGCG
GCAAACGTGA TCTTTCTGGC AGCCGCCGTC TACCTCTGGA TTTCGAACCC GTCCGGCGGC
TGA
 
Protein sequence
MRIIPRYVLR HFLPVFMLAL FTFTSLYLIV DFFENMEQFI EKRVPAADTI AYFLNKTPSV 
AAQGIPMAAL LGALITLGLL KRNRELIALE AAGVKTVTYV TPIVAAAFFI AAVHLVLGET
VSRSMNQVST KIWNEQVQRR KGHFSWGVEN VWYHGQNVIY QVRFYDKRTQ TLEKVSLFFL
DPSFRLVQRL DARRFRWDGA RWQAEQGLFL KFSESGTEQE TFDQRAFTLQ ETPADFSGLE
TIPEELDWLD LYRYAEKIRQ EGYNSLPYII ELHLRVAFPL SAIVLAILGI IIALRQSMHG
GIALGVGIGL LVGSSYFVVQ QLGCALAGAG ALPPVVGVWA ANVIFLAAAV YLWISNPSGG