| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0154 |
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| Symbol | |
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| ID | 4461435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 187113 |
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| End bp | 189023 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700909 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_844291 |
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| Protein GI | 116747604 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT TCTACATCAC CACCCCCATC TACTATGTGA ATGCCGAACC GCATATCGGA
CACGCTTACA CCACCATTGT GGCGGATGTG ATGAATCGTT TCCACAAGCT GATGGGATTC
GGGACATTCT TTCTCACCGG CACGGATGAG CACGGCGACA AGATCGTCCA GGCGGCCGCC
GATGCCGGTA CGGCTCCCAA GGAATATGCC GACCGCATCA GCGGGATGTT CAAGGAAGCC
TGGTCGAAGC TCAACATCAG CAACGACCAC TTTATCCGCA CCACGGACCC GGAACACATC
CGGGTGGTTC AGCACATCCT CCAGCAGGTT TACGACTCGG GAGACATCAC CTTCAGCACG
TACCGGGGCC TATACTGCGT GGGTTGCGAG CGTTTTTACA CGGAACGCGA GCTGGTGGAC
GGCAAATGCC CCGATCACGA CAAGGAACCG ATCGAGCGGG AGGAAGCGAA TTATTTTTTT
CGCATGAGCA AGTATCAGAA CTGGCTCATC GAGCATATCG AGTCGAACCC GGATTTTATC
AGGCCGGAAC GGTATCGCAA CGAAGTGCTT GCCTTCCTGA GAGAACCCCT CGAGGATCTT
TGCATCTCCA GGCCCAAGGA ACGGCTCGCC TGGGGGATCA CTCTGCCCTT CGACGAGCGT
TACGTGACTT ACGTCTGGTT CGACGCACTG ATCAACTACG TATCCGCTCT CGGATACCCC
GACGGACCGC TCTTCGGAGA ATTCTGGCCC GTGGTGCAAC ACACCATCGC CAAGGACATC
CTCAAACCTC ACGGCATCTA CTGGCCGACC ATCATCAAGG CGGCGGGCTT CCCGGTTTAT
CGACACCTCA ACGTCCACGG CTACTGGAAG ATCAATGAGG GGAAGATGAG CAAGAGCAGG
GGGACGGTGG TGCGACCGCT GGATATGATC CCCCTCTACG GGCTCGACGC CTTTCGTTAC
TTCCTGCTTC GCGAAATGGT GTTCGGCCTC GACGCCAACT TCAGCGAGGA CGCCCTGGTG
CAGCGTTTGA ATTCCGACCT GGCCAACGAC CTGGGCAATC TTTTCAGCCG GACGCTGGCC
ATGACGCTCA AGTATTTCGA CGGCAAGGTG CCTCCCTTCG GCTCCGAACC GGACGATATG
GACCGGGACC TCATCTCCCG GGTCGAACGG ACCGTTGCGG AGTTCCGCGA GGAGCTTCCG
GTATTCTGCT TCCACAAGGC TCTGATGTCC ATATGGGAAT GCCTGAATGC CGCCAACAAG
TACATCGATA CTGTCGGCCC CTGGGGGCTT GCCAAAGACC CGAGCCGGCA CGGCCGCCTC
GAGACCGTGA TCCGGATTCT GCTCGAACTG AACAAGACCA TGGCGGTGCT GATCTCCCCG
TTCATGCCGT CCACTTCCGA AAAGATGCTC GAGCGGCTGG GCGTGGTGAA GCGTTCCATC
GATTTGAGGC TCGCTGAAGA CGGCCGCTGG GGCACCCTGG TCGAGGGGAC CCCGGTTTCC
AAGGGAGATG CGTTGTTTCC CCGGATCGAC ATCAAGGAGG AACGAAAACC CGCCGTCCCC
CGGCAACCCG AGAAACGGCA GCCGAGCTTG CCCCTCCTGG ACCTGGAAGC ATTCAAGCAG
GTGGATTTGC GCACCGGCGT GGTGAAGCAT GCCGAACGAG TCCCAAAATC CGAGAAGCTG
CTGCGGTTGT TGGTGGATAT CGGTGAAGAG CGGCAGGTGG TCGCCGGAAT CGCCCAGAGC
TATTCGCCGG AGGAGCTCAC GGGCAAACAG GTCGTCGTGG TGGCAAATTT GAAACCTGCC
AAGCTGATGG GTATCGAGTC CCACGGAATG GTCCTGGCCG TCAGGGATGG CGATGCGCTG
CGCCTTCTCA CCACGGAAAA ACCTGTCCCG GCCGGCTTGA GAGTCTCTTG A
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| Protein sequence | MNRFYITTPI YYVNAEPHIG HAYTTIVADV MNRFHKLMGF GTFFLTGTDE HGDKIVQAAA
DAGTAPKEYA DRISGMFKEA WSKLNISNDH FIRTTDPEHI RVVQHILQQV YDSGDITFST
YRGLYCVGCE RFYTERELVD GKCPDHDKEP IEREEANYFF RMSKYQNWLI EHIESNPDFI
RPERYRNEVL AFLREPLEDL CISRPKERLA WGITLPFDER YVTYVWFDAL INYVSALGYP
DGPLFGEFWP VVQHTIAKDI LKPHGIYWPT IIKAAGFPVY RHLNVHGYWK INEGKMSKSR
GTVVRPLDMI PLYGLDAFRY FLLREMVFGL DANFSEDALV QRLNSDLAND LGNLFSRTLA
MTLKYFDGKV PPFGSEPDDM DRDLISRVER TVAEFREELP VFCFHKALMS IWECLNAANK
YIDTVGPWGL AKDPSRHGRL ETVIRILLEL NKTMAVLISP FMPSTSEKML ERLGVVKRSI
DLRLAEDGRW GTLVEGTPVS KGDALFPRID IKEERKPAVP RQPEKRQPSL PLLDLEAFKQ
VDLRTGVVKH AERVPKSEKL LRLLVDIGEE RQVVAGIAQS YSPEELTGKQ VVVVANLKPA
KLMGIESHGM VLAVRDGDAL RLLTTEKPVP AGLRVS
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