Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0150 |
Symbol | |
ID | 4461431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 182171 |
End bp | 183520 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639700905 |
Product | sun protein |
Protein accession | YP_844287 |
Protein GI | 116747600 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.958214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.637853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAACG CCAGGGTCTT GGCCTTTCAG ATTCTCCTGC ACATGGACCG CGATGCCTCT CACCCCGATC GTCTCATACG CGGCATGCTC GGCCGGCACG AGCGCCTCGA GGAAAGGGAC AGAGCGCTCC TGACCGAGCT CGTGTATGGA GTTCTTCGCT GGCAGGGCCG GCTTGACTGG CACATCGACC AGCTGAGCAG GACCCGCCCG GAAAAAATCG ACCCCGCCGT CCGCATTCTT CTGCGACTCG CCCTTTATCA GATACTCATG CTCGACCGCA TCCCCGACCA TGCCGCCGTC AACGAAGCCG TGAATATGGC GAAAACAACC CAGCCCGCGT ATCTCGTAAA GTTCGTCAAC GGGGTCCTGC GCGAGGCTCT GCGCCGCCGG AGCCGCTGGA TATGGCCGGA AGCGGGCGAA GAACCGGGCA AGTACATCGC CGTGACCACC GCGCATCCGA TATGGTACGT GGAGCGGCTC CTGCACGAAT TCGGATTCGA GGAGACCCTC GATATCTGCA ATGCGAACAA CACCGTTGCC CCGATGACGT TGCGCGTCAA TGCCCTCAAG ACTTCGATCG ACACGATCCT CCAATGGTGC GCGGAACATG GGATCGACGC CGAGCCGTCG GGAGTTGTCC CGACGGCGGT GCGCTTGAGC GGTTTGCGAC GGGACCTTGC CGAGACGTCC ATCTACCGGG ACGGTTTGGT GCAGGTGCAG GACGAGGCGT CCCAGATCGT TTCCACGCTT GTGGCTCCCA GGGCAGGGGA GCGGGTGCTG GACCTGTGTG CCGGATTCGG CGGCAAGTCC ACTCACCTGG GCATCCTCAT GGGTGACCGG GGAGAGGTCG TCGCCGTGGA CAATTCCGCC TGGAAACTGG AAGAGCTTCG AAAAAACGCC CGGAGACAGG GCCTGCGCAT CATCAAGCCG CGCACGGCGG ACCTGTTCGA ATTCTCTCCC GGAACGGAGG ACCTTTTCGA TCGGGTTCTG CTCGATGCGC CGTGTTCGGG GTTCGGGACC CTCCGGCGCA ACCCGGACAT CAAATGGCGG CGGCACCTCA AGGATCCCCG ACGGTTTGGA AGGATTCAGA AGGAAATGCT GGACCATGCC GCACGGTTCG TCAAGCCGGG GGGCGCCCTG GTCTATTCCG CGTGCACGCT GTTTCAAGAA GAAAACGATG CGGTCGCCGA GCACTTTGCG GCTTCTCATC CGGACTGGCA AATCGAGCCC GTCGGTCCCG ATTTGCCCGA TGCCTGCCGG GGGATGGCGT CCGGCCCCTT CTTCCGCACC TGGCCGCACC GCCACCAGGT GGACGGCTTC TTTGCCGCCC GCTTGAAGCG ACCTGCCTGA
|
Protein sequence | MINARVLAFQ ILLHMDRDAS HPDRLIRGML GRHERLEERD RALLTELVYG VLRWQGRLDW HIDQLSRTRP EKIDPAVRIL LRLALYQILM LDRIPDHAAV NEAVNMAKTT QPAYLVKFVN GVLREALRRR SRWIWPEAGE EPGKYIAVTT AHPIWYVERL LHEFGFEETL DICNANNTVA PMTLRVNALK TSIDTILQWC AEHGIDAEPS GVVPTAVRLS GLRRDLAETS IYRDGLVQVQ DEASQIVSTL VAPRAGERVL DLCAGFGGKS THLGILMGDR GEVVAVDNSA WKLEELRKNA RRQGLRIIKP RTADLFEFSP GTEDLFDRVL LDAPCSGFGT LRRNPDIKWR RHLKDPRRFG RIQKEMLDHA ARFVKPGGAL VYSACTLFQE ENDAVAEHFA ASHPDWQIEP VGPDLPDACR GMASGPFFRT WPHRHQVDGF FAARLKRPA
|
| |