| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0146 |
|---|
| Symbol | |
|---|
| ID | 4461513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 178418 |
|---|
| End bp | 179428 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639700901 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_844283 |
|---|
| Protein GI | 116747596 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.90394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCACGA AGCGATTCTC CACAACCACG ACGGATGCGA CGGCGCCCGA AGTCAGCATC
GTCATTCCGG CCTACAATGA AGCAGACGGC ATCGGCAATC TCATCTCGCG GGTCCACGCG
GTGATGACCT CGGCCGGCCG TTCCTACGAA GTGATCGTCG TCGACGACGG CTCAGCCGAC
GACACCGCGG ACAATGCGCG GCGCGCCGGC GCGAGAATCG TCCGGCATCC GTACAACATG
GGCAACGGCG CGGCGGTGAA GACCGGCATA CGCAGCAGCA GAGGCGGGAT CCTGGTCATG
CTCGACGCCG ACGGCCAGCA CCCCCCCGAC TACATTCCGG AGATGCTCGA AAAGACGGCG
GACTACCACA TGGTCGTCGG CGCCCGGACC AGGTCGTCGG AAACGAGCAT CCACAGAGAC
CTCGCCAACA CCATTTACAA CTGGCTGGCA ACCTATGTTT GCGGTCGCAG GATCGAAGAC
CTCACCTCCG GCTTCAGAGC CGTCAGGGCG CACGTGGCCC GCGAATTCGT GTCCCTGCTG
CCGAACACCT TCTCGTATCC GACAACCATC ACCCTAGCGA CGATCCGCTC CGGGTACGGA
CTGACCTACC TTCCCATCAA GGCGGATCGG CGTGCATCCA ACAGCAAGAG CAAGATCAAG
CTCCTGCGGG ACGGTTCCCG GTTCCTCCTG ATCATTTTCA AGATCGCGAC ACTCTTTTCT
CCCATGAAAA TATTCCTTCC CGCCAGCGTT GTCACTTTCC TGCTCGGCCT GGGTTACGGT
CTCTACAAGG TTGTCGTCCT CGACGGGCGG TACGGCCCGA CATCCGCCAT GTTCATGACT
TCCTCGATCC TGATGTTTCT CATCGGCCTG GTGTCCGAAC AGATCACTCA GAGCAGATTC
GACCGCATGG AGTTTGTCGT CGACCCGGCA CCCGTCGTCG ATGCGACGGA CAGCGCCGGT
CAATCACCGC TCGCCGGCGA TGAGCTTCCC GGGAAACAGG CCGGGCTTTG A
|
|---|
| Protein sequence | MLTKRFSTTT TDATAPEVSI VIPAYNEADG IGNLISRVHA VMTSAGRSYE VIVVDDGSAD
DTADNARRAG ARIVRHPYNM GNGAAVKTGI RSSRGGILVM LDADGQHPPD YIPEMLEKTA
DYHMVVGART RSSETSIHRD LANTIYNWLA TYVCGRRIED LTSGFRAVRA HVAREFVSLL
PNTFSYPTTI TLATIRSGYG LTYLPIKADR RASNSKSKIK LLRDGSRFLL IIFKIATLFS
PMKIFLPASV VTFLLGLGYG LYKVVVLDGR YGPTSAMFMT SSILMFLIGL VSEQITQSRF
DRMEFVVDPA PVVDATDSAG QSPLAGDELP GKQAGL
|
|---|
| |