| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0126 |
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| Symbol | |
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| ID | 4460436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 155744 |
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| End bp | 156199 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700882 |
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| Product | Tfp pilus assembly protein PilE-like |
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| Protein accession | YP_844264 |
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| Protein GI | 116747577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0148502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTATCA AGATGCGTGA AAGTAAGGGT TTCACCCTGG TTGAGTTGAT GATCGTCGTG
GCTATTATCG GTATTCTGGC CGCCGTGGCG GTGCCGTACT ATCAGAAATA CATCCAGAAG
TCCCGCATGG TTTCGAAGGT TTTCCCCGGC ATGCATGCCA TCGAGACCAA CATGGGCACG
TACTTCAGCT TTAAGAACAC GTTGCTTGAC GTCGGTAGCA CTGCCACCTT CGGGCAGTTT
GTGCAAGACG CCGACACTAA GTGCTTCTCC CCCAGTTGGG CGGGCGAATA TCTGCTGATC
ACGATTAAGG ATCCCACCTT GTGCCAGGAA CTGAAGGCAC TGACGGGGAT GACCCTCTCC
GCGACGCCGA GGATGGATAC CAGCCGGACC AAGATCAGGG GCTGGGCTCT CGCTGGTCCC
CTGGCCGTTC AGCTCGGACT CGAGGGCGAG CAATAG
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| Protein sequence | MFIKMRESKG FTLVELMIVV AIIGILAAVA VPYYQKYIQK SRMVSKVFPG MHAIETNMGT
YFSFKNTLLD VGSTATFGQF VQDADTKCFS PSWAGEYLLI TIKDPTLCQE LKALTGMTLS
ATPRMDTSRT KIRGWALAGP LAVQLGLEGE Q
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