| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0123 |
|---|
| Symbol | |
|---|
| ID | 4460433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 151608 |
|---|
| End bp | 152069 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639700879 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_844261 |
|---|
| Protein GI | 116747574 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0839092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTCC TGGTGGCCGT CGCCGGCACG ATCATTCTTC TGGATCAACT GACCAAGCTC
CTCATCCTGT ACTATGTGCC CGTCAACACG GGACACGTCG TCATCCCCGG TTTTTTCAAC
CTGATCCACG TCCGGAACAC CGGAGGAGCT TTCAGCATGC TGGCGGGAGC CGACGCAACG
TGGCGCCTGC CTTTCTTCGT GGCGATGACC CTGATTGTTG TCGGGATCAT CGTGTGGGCC
TACCGGAAAA TCGACAGGCG GGAACTCTGG ACCCGCACCG CCTATGCGCT CATCTGCGGA
GGCGCTCTGG GAAATCTCTC GGATCGTCTG CGCTTCGGGG AAGTGGTGGA CTTCCTGGAA
TTTCACATCG GGACTTATTC GTGGCCGGCT TTCAATGTCG GGGACAGCGC CATTTCCGCC
GGCGCGGTCA TGCTCATCAT CGCGCTGCTC AGGGGCAAGT AA
|
|---|
| Protein sequence | MVFLVAVAGT IILLDQLTKL LILYYVPVNT GHVVIPGFFN LIHVRNTGGA FSMLAGADAT
WRLPFFVAMT LIVVGIIVWA YRKIDRRELW TRTAYALICG GALGNLSDRL RFGEVVDFLE
FHIGTYSWPA FNVGDSAISA GAVMLIIALL RGK
|
|---|
| |