Gene Sfum_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0120 
Symbol 
ID4460430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp146297 
End bp146587 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID639700876 
Productchaperonin Cpn10 
Protein accessionYP_844258 
Protein GI116747571 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0427234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA GACCGCTCAA TGATCGTGTG GTGGTAAAAC GCACCGAAGA GGAAGAGAAA 
ACGGCCGGAG GCATCATCAT TCCCGACACC GCCAAGGAAA AGCCCATCCA GGGCGAAGTG
GTTGCCGTCG GCAACGGCAA AGTCATGGAA GACGGCTCCA GACGGCCCCT CGATGTGAAG
GCCGGCGACA AGGTCCTGTT CGGCAAGTAC GCGGGCACGG ACATCAAGGT GGGAGGAGAA
GAACTCCTGA TCATGCGCGA AGACGATATC CTGGCGATCA TTGAAAAATA A
 
Protein sequence
MNLRPLNDRV VVKRTEEEEK TAGGIIIPDT AKEKPIQGEV VAVGNGKVME DGSRRPLDVK 
AGDKVLFGKY AGTDIKVGGE ELLIMREDDI LAIIEK