Gene Sfum_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0115 
Symbol 
ID4460425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp139127 
End bp140335 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content60% 
IMG OID639700871 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_844253 
Protein GI116747566 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0109855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGA CACTCATTTT AACCGGAACT CAGGCCGCGG CACTGGCGGC CAAGCTATGC 
CGAGTGCAGG TCATAGCGGC TTATCCGATC ACGCCTCAAT CGAAAATCCC CGAAGTGCTT
TCCGAGTATG TGGAAAAGGG TGAGCTGCAA GCGGAATTCG TCCGGGTCGA AAGCGAGCAT
TCGGCCATGG GAGTGTGCAT TTCGGCTTCG CTGGTCGGGG CCAGGGTCTT TACCGCCACC
GCGGCCAATG GGCTGGCCTA CATGCACGAA CAGCTCCACT GGGCCGCGGG CGCCCGTGTT
CCCGTGGTCA TGCCGGTCAC CAACCGCGGC CTCGGTGCGC CGTGGACGAT CCTCAACGAC
ATGCAGGACA CCATCGCCCA GCGCGATACC GGCTGGATGC AATTTTACTG CATGAACAAT
CAGGAAGTCC TGGACCAGGT CATTCTTGCC TACAAGGTCG CAGAGCAGCT CATGGTACCC
ACGATGGTCT GCTTTGACGG CTTCAGGCTC TCGCACACGA TGATGCCCGT CTCCATCCCG
GCCCAGAGCG ATGTCGACAA GTACCTTCCT CCCTATGAGC CCCTGCACTC CATCGACTCG
GGAAATCCGG TGAATATCAA CCCGGTGGTG ATGACCGACC CGCTCAGGGG ACCCGACGGG
GAACTGTGCC CAAGCTACAT GGGATTCCGA TTCCGTTTGC AGGAAACGAT GGAATCGGCG
CTTCCCGTTA TCGCCGAAGC CGGTCGATCT TTCGCCGAGC GATTCGGCCG CTCCTACGAG
GACAATCTCC ATCGCTACCG GACCGAGGAT GCCGAATTCA TCTTTCTCAC GATGGGTTCC
CTCGCCAGCG AGGCGAGCGA CACGGTGGAC ATTCTGCGTG AGCGGGGTGT GAAGGCCGGA
GTCGTCGGCA TCCGCGTCTT CCGTCCTTTT CCCGCTGCAT CGCTGGTCGA GGCGACGTGC
AGGGCCAAGT CCGTTGCGGT GGTCGAAAAG GCCATCAGCT ATGGGTATGA AGGCGCCCTG
GCGACGGAGC TCAAAGCGGC TCTTTTCAGT CGAAACGGGC ATCGTCCGGT AATCTACAAC
TACATTACCG GCCTGGGCGG AAAGGACGTG AAACCCACGG ATCTCCTCGA GGTCGCTCAG
GAAATCATCA ACGGCGCCGC CGGAAACATT CCCCAGGAAA AACCGCGTTG GCTGGGGTAC
GGTGTCTGA
 
Protein sequence
MGQTLILTGT QAAALAAKLC RVQVIAAYPI TPQSKIPEVL SEYVEKGELQ AEFVRVESEH 
SAMGVCISAS LVGARVFTAT AANGLAYMHE QLHWAAGARV PVVMPVTNRG LGAPWTILND
MQDTIAQRDT GWMQFYCMNN QEVLDQVILA YKVAEQLMVP TMVCFDGFRL SHTMMPVSIP
AQSDVDKYLP PYEPLHSIDS GNPVNINPVV MTDPLRGPDG ELCPSYMGFR FRLQETMESA
LPVIAEAGRS FAERFGRSYE DNLHRYRTED AEFIFLTMGS LASEASDTVD ILRERGVKAG
VVGIRVFRPF PAASLVEATC RAKSVAVVEK AISYGYEGAL ATELKAALFS RNGHRPVIYN
YITGLGGKDV KPTDLLEVAQ EIINGAAGNI PQEKPRWLGY GV