Gene Sfum_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0113 
Symbol 
ID4460423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp136838 
End bp137836 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content60% 
IMG OID639700869 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_844251 
Protein GI116747564 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC GAACCGCATA CATCAAGTCG GTCGGCCGAT TCCTTCCGGA ACGGCGGCTG 
ACGAATAAAG ACCTGGAAAA GATGGTGAAC ACCAACGATG AGTGGATCAT GACCCGCACG
GGTATCCGGG AGAGGCGCAT TTTGGAGCCC GGCCTGGGGA ATTCGCACAT GGCCGTCAGG
GCCTCTCGGG AGTGCCTGGA CCGCGCGGGT GTCGACCCGA TGGAACTCGA TGCCATCATC
GTTGGGACCG TCACTCCCGA TATGCTGTTT CCCGCCACCG CGTGCCTCGT GCAAAACGCT
CTCGGGGCGA AGAACGCCTG GGGATACGAC CTGTCGGCCG GTTGTTCGGG GTTCCTCTTC
TCCCTCACCA CGGGCGCGCA GCTGATCGAA TCCGGGCGGA ACCACAAGGT TCTGGTGATC
GGGAGCGATG TCATGAGCAG CATTCTCGAT TACGAGGACC GGAACACGTG CGTGCTCTTC
GGTGACGGCG CGGGCGCCGT GCTCCTTGAA CCGTGCCCCG AAGGGGGGCA CGGGTTGATC
GACTTCATCC ACCACATCGA TGGTTCCGGG GGGCCGCTCC TGTACATGAA AGCGGGCGGC
AGTCTGTATC CTCCCAGTCC GGAAACGGTC CGAAACAAAG AGCATTTTGT CACCCAGGAA
GGCAAGCAGG TATTCAAGGC GGCCGTTACG GAAATGGCGA ACGTGTCGGC GGAAATCCTG
GAACGCAACG GGTTGACCGG CGATGATGTG GCGTTGTTCA TTCCCCACCA GGCCAATCTG
AGAATCATCG ACGCCTGTGC CAACCGGATG GGGATAGATC ACGACAAGGT GGTGATCAAC
ATCGATCGTT ACGCAAACAC GACTTCGGGG ACTCTGCCGC TTTGCCTCTA CGACGCCGTG
GTGGAACAGG AGCGTCTCAA GAAGGGCGAC TACGTCGTCA TGTCCGCTTT TGGCGCGGGG
TTTACCTGGG GGAGCATTCT CCTGCGATGG TGGCGATGA
 
Protein sequence
MPVRTAYIKS VGRFLPERRL TNKDLEKMVN TNDEWIMTRT GIRERRILEP GLGNSHMAVR 
ASRECLDRAG VDPMELDAII VGTVTPDMLF PATACLVQNA LGAKNAWGYD LSAGCSGFLF
SLTTGAQLIE SGRNHKVLVI GSDVMSSILD YEDRNTCVLF GDGAGAVLLE PCPEGGHGLI
DFIHHIDGSG GPLLYMKAGG SLYPPSPETV RNKEHFVTQE GKQVFKAAVT EMANVSAEIL
ERNGLTGDDV ALFIPHQANL RIIDACANRM GIDHDKVVIN IDRYANTTSG TLPLCLYDAV
VEQERLKKGD YVVMSAFGAG FTWGSILLRW WR