Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0076 |
Symbol | |
ID | 4461166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 93794 |
End bp | 94720 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639700828 |
Product | tRNA synthetase, class II (D, K and N) |
Protein accession | YP_844214 |
Protein GI | 116747527 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000211286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGAAC GGAATATCCT GTCCGCAAAG CGCGACGCGC TCGAGCTCCG CTCCCGGGTC ATCGAGCGCA TTCGCAGTCA CTTCCGGCGG GCGGGATTCC TGGAAGTCCA GACCCCGTTG CTGACCCCGG CTCCCGCTCC CGAGCTCAAT ATCGAAGCCG TGCCCGCCGG TGACGGCTTT TTTCTCGCAA CCAGCCCGGA GCTTTACATG AAGCGCCTCC TGGCGGCCGG ATACGGGAAA CTCTTCCAGC TCACCCCCGT TTTCCGAAGC GGAGAAAGGG GCCGATTGCA CCACCCGGAG TTCACTTTGC TGGAATGGTA CCGAACGGGA GCGAGCTACA AGGACATGCA ACGGGATTGC GTGGAGCTGC TGCACGAGGT TTGTGCCTTC GGAGCGGCCA CGGGTGGGGG GACATGCCGC GGCAGCGTGA TCGAACCCGG AAAACCATGG GAATCCCTGA CCGTTCGCGA CGCCTTCTTA CGCCTTGCGG GATGGGACCC GGTCGTCGAC TTTGACCCCG ACCGCTTCGA TGTCGACCTG GTGACGAAGG TGGAGCCCTA TCTCGGGTTC CCCAACCCCT GCTTTTTGGA AGACTATCCA CCCGAACGGG CCGCACTGGC CCGTCTGAAG GACTCCGCCC CCCCCGTGGC AGAGCGCTTC GAGCTGTATT GGGCAGGAAT CGAGCTTGCC AACGGCTTCA CGGAACTGAC CGATCCCGCG GAGCAGCGGA AGCGCTTCGA GGCGGTACTC GCGGACCGAC ACGAGGCGGG GCTTTCATCA AGACCGATGC CGGAAGCCTT TCTGGCCGCC ATAGAGCATC TTCCGCAATG CGCCGGAATA GCCCTCGGCC TTGACCGGCT CGTGATGCTC CTGGCCGGAG CGGACAGCGT CGACCGGGTG GTTGCGTTCC CTCCCGATCT TCTCTGA
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Protein sequence | MPERNILSAK RDALELRSRV IERIRSHFRR AGFLEVQTPL LTPAPAPELN IEAVPAGDGF FLATSPELYM KRLLAAGYGK LFQLTPVFRS GERGRLHHPE FTLLEWYRTG ASYKDMQRDC VELLHEVCAF GAATGGGTCR GSVIEPGKPW ESLTVRDAFL RLAGWDPVVD FDPDRFDVDL VTKVEPYLGF PNPCFLEDYP PERAALARLK DSAPPVAERF ELYWAGIELA NGFTELTDPA EQRKRFEAVL ADRHEAGLSS RPMPEAFLAA IEHLPQCAGI ALGLDRLVML LAGADSVDRV VAFPPDLL
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