Gene Sfum_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0072 
Symbol 
ID4461162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp89274 
End bp89750 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID639700824 
Producthypothetical protein 
Protein accessionYP_844210 
Protein GI116747523 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.587358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0153972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC GGCCTTCGCC CGAAAAGCGT TTCGTGGTCG ATATCATGCT CGGGAAGGTT 
GCCAAATGGC TGCGCATCCT CGGCTTCGAC GCCCGATGCC TGCGGGTGGA CAGTTCCGCT
CAAGTGACTC GGTTTCGGGA AGAAGGCCGG ATCATCGTGA CGAGGCGTCG GCAGTGGTGT
GGTTCGACCG GGGTTTTTTG CCTGACATCC AACGATCCTT CCGAACAGCT CAAGGAATTG
ATCGCGGCCG TGCCGATCCG GCTGGAGGAG CTCAGACCAC TTCGCCGCTG CATCCTCTGC
AACCTGGACC TCGAAGTCCT CCCGCGCGAC CGGGTATTCG GCAGAGTCCC CGACTTCGTT
TTCGAAACGA ACGAGTGTTT TCATCACTGT CCGGGATGCG GTAGAATCTA CTGGCCCGGA
ACCCACCTCG TGCGCATGGT GGAGCGCATG CGGCGTGAAT TGAACTGGTC CGGCTGA
 
Protein sequence
MSERPSPEKR FVVDIMLGKV AKWLRILGFD ARCLRVDSSA QVTRFREEGR IIVTRRRQWC 
GSTGVFCLTS NDPSEQLKEL IAAVPIRLEE LRPLRRCILC NLDLEVLPRD RVFGRVPDFV
FETNECFHHC PGCGRIYWPG THLVRMVERM RRELNWSG