| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0058 |
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| Symbol | |
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| ID | 4461148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 72652 |
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| End bp | 73956 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700810 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_844196 |
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| Protein GI | 116747509 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.586159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.874852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTT CCGCCGACAG GGGATTCTTG ATGCACCATT TCCACTATCA CAACGATGAG
CTTTACTGCG AACGGGTTCC CCTGCGCGAA CTGGCTGCGC GCGTGGGAAC TCCATGCTAC
GTTTACAGCC ACGCCACGCT GCTCCATCAC TTCACGGTGT TCGACTCGGC GTTCGAGGGC
GTGCCCCACC TGACCTGTTT CTCGGTCAAG GCCAATTCCA ACCTGGCGGT ACTGCGGCTG
TTCGGTTCCC TTGGTGGCGG GGTCGACATC GTTTCGGGCG GTGAGCTCTA TCGAGCCCGA
CAAGCGGGGA TAGCTCCGGA TAAGATCGTT TATTCCGGGG TGGGCAAGAC CCTGGAGGAA
ATCGACTACG CACTGCGGGA AAACATCCTG ATGTTCAACA TCGAATCCAC GCAGGAACTG
GAGGCCATCA ACGCGCGGGC CGCCGCTTTC GGGTGCCGGG CACGCATCGC ACTGCGGGTC
AACCCCGACG TCGATCCCAA CACCCACCCG TATATTTCCA CGGGAATGAA AAAGAACAAA
TTCGGAATCG AGATCGACAG CGCGGTCAAA GCATACGAAC GCGCCAGGAG CCTCGACCAT
GTCGAGGTGG TCGGTGTCGA CTGCCACATC GGGAGCCAAT TGACCGAAAT CTCGCCGTTT
GTGGATGCGC TCAAGCGGCT GCGCTTGCTG ATCGAGAAGC TCGAGGCGGT CGGAATCACG
ATCCAATACC TCGATCTGGG CGGCGGACTC GGTATCGTTT ACGACCAGGA GGCCCCCCCG
GAGCCGCGCG AATATGCCCG AGCCATTCTG CGGGAGCTGA AGGGAATGCA TTGCACATTG
ATTTTCGAAC CGGGGCGCGT TATCGTCGGC AACGCAGGGG TTTTGCTGGC CAGAGTGCTC
TACACCAAGA GAACGCAGAG CAAGAGCTTC ATCATCACCG ATACGGCCAT GAACGATCTG
ATCCGCCCCA GCCTGTACGG TTCCTATCAC CAGGTCCAAC CATTGCGGAG ACAGAGCAGG
GAAAGCCACA TTGTGGATGT TGTGGGGCCG ATTTGCGAAT CGGGGGATTT CATCGCCAAG
GACCGGGGAC TGCCCATGGT CGAATCGGGA GACTTCCTGG CGGTCATGAG CGCAGGCGCC
TACGGGTTCA CCATGTCGTC GAACTACAAT TCGAGGCCGC GGGCCGCGGA GGTATTGGTC
AAGGACGACC GGTATTTTGT GATAAGAAGA CGGGAGACCT GGGACGATTT GATCCAGTGC
GAAACCATTC CCGCTTTCTT GAGCTCGGAC AAACAGCCGG CCTGA
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| Protein sequence | MTGSADRGFL MHHFHYHNDE LYCERVPLRE LAARVGTPCY VYSHATLLHH FTVFDSAFEG
VPHLTCFSVK ANSNLAVLRL FGSLGGGVDI VSGGELYRAR QAGIAPDKIV YSGVGKTLEE
IDYALRENIL MFNIESTQEL EAINARAAAF GCRARIALRV NPDVDPNTHP YISTGMKKNK
FGIEIDSAVK AYERARSLDH VEVVGVDCHI GSQLTEISPF VDALKRLRLL IEKLEAVGIT
IQYLDLGGGL GIVYDQEAPP EPREYARAIL RELKGMHCTL IFEPGRVIVG NAGVLLARVL
YTKRTQSKSF IITDTAMNDL IRPSLYGSYH QVQPLRRQSR ESHIVDVVGP ICESGDFIAK
DRGLPMVESG DFLAVMSAGA YGFTMSSNYN SRPRAAEVLV KDDRYFVIRR RETWDDLIQC
ETIPAFLSSD KQPA
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