| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0050 |
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| Symbol | |
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| ID | 4460990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 66160 |
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| End bp | 66795 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639700802 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_844188 |
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| Protein GI | 116747501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATC CGACAAGACT AGGTGTGGCC TCCATAGCAA CCGCCTGGGG TATGATTTGC
CTGTTGCTTC TCTTTCAATC TCATGCGCGG GCGGACATTT ACAAGTACGT GGACAAGGAC
GGCGTGATCC ACTTTACCAA TACGCCCGTG CAACCGGAGG CCAAATCGCT GACCCTGCCT
CCGGTTACGC AGGCGAACTT CGTCAAGTAT TTTCCGCACC GTACGTTCTA CTCCGCCTGT
AACCCCAAGA ATCAGAATTA CTTCGACCCG CAGATCAGGA TGGTTTGCAT GCGGCACGGA
CTGGACTACA ACCTCGTGCG GGCCGTGATC AGGGCCGAAT CCGGGTACAA TCCACAGGCG
GTTTCCCCCA AGGGTGCCAT GGGCCTGATG CAGCTGATGC CCGGCACATC CAGGGATCTG
GGAGTGCTCA ACCCCTTCGA TCCCGGCGAG AACATCGACG GGGGAGCCCG CTACCTCAAA
ATGCTCATCG AGCGGTTCAA CAACATCCCC CTGGCTGTCG CCGCCTACAA TGCCGGTCCC
GAAAATGTCG AGAAGTACAA GGGAATTCCA CCCTTCGATG AAACGCAGGT TTACGTACAG
CGTGTGATGG ATTACTATTC CCGCTATAGA CAATGA
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| Protein sequence | MKHPTRLGVA SIATAWGMIC LLLLFQSHAR ADIYKYVDKD GVIHFTNTPV QPEAKSLTLP
PVTQANFVKY FPHRTFYSAC NPKNQNYFDP QIRMVCMRHG LDYNLVRAVI RAESGYNPQA
VSPKGAMGLM QLMPGTSRDL GVLNPFDPGE NIDGGARYLK MLIERFNNIP LAVAAYNAGP
ENVEKYKGIP PFDETQVYVQ RVMDYYSRYR Q
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