Gene Sfum_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0047 
Symbol 
ID4460987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp62717 
End bp63652 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID639700799 
Productcarbamate kinase 
Protein accessionYP_844185 
Protein GI116747498 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0549] Carbamate kinase 
TIGRFAM ID[TIGR00746] carbamate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAA GGAAACCCAT CCTTTTGGTC GCCCTGGGCG GCAATGCGCT CATTCGCAAG 
GGACAGCAGG GCACGATCCC CGAACAGCTG GAGAACCTGC GCGTTCCGCT GCGACAGATC
GCGCGGCTGG CGGAAGCGCA CCGGATTATC ATCACGCACG GCAACGGCCC CCAGGTCGGG
AATCTGTTGC TGCAGCAGGA ATGCTGTTCC GAGGTTCCGA GGCTGCCTCT CGAAATCCTC
GTGGCCCAGA CGCAGGGCCA GATCGGCTAC ATGATTGAAT CCACTCTGGA CAGCGAGCTC
ATGAGCCTCG GCGTCGACAA GGAACACTAC ATTGTGAGTG TCCTCAGCTA CGTTGTGGTG
AATGAAGACG ACCCGGCCTT CCTGCATCCT TCGAAACCCA TCGGCCCGGC CTTCAACGAA
GCGGAGGCGG CCCGGCTTCC GTACCCGACG GTGAGAACCG ACAAGGGGTA CCGGCGGGTG
GTTGCGTCCC CGAAACCGGT CACTATCGTG GAAAAAAGGG AAATCAAGCG GTTGATCGAT
CTGGGCTTTA TCGTCATTTC CTGCGGCGGC GGGGGCATTC CGGTGATCCG GGACAGCCGG
ACTTTTCACG GCGTGGACGC CGTGATCGAC AAGGACCTGG CGAGTGCGCG GCTGGCGGGG
GAGATCGGCG TGGACATCTT TCTTATCGCC ACGGACGTGG AAGGCGTGGC GCTGCATTAC
GAACAGGAGA CGCGCCGGAG CTGGCTGCGC AGCGTGAGTG TCGGCGATGC CGGCCGGTTC
CTCGAGGAAG GACATTTCCC GCCGGGATCC ATGGGACCGA AAGTGGAGGC GTGCATCGAA
TTCATGAAAC ACGGGGGAAC ACGCGCCGTA ATCGCTTCCA TCGAGCGGAT CGAGGCCGCC
GTCCAAGGCG CGGCCGGCAC GGAATTCGCT CCGTGA
 
Protein sequence
MAVRKPILLV ALGGNALIRK GQQGTIPEQL ENLRVPLRQI ARLAEAHRII ITHGNGPQVG 
NLLLQQECCS EVPRLPLEIL VAQTQGQIGY MIESTLDSEL MSLGVDKEHY IVSVLSYVVV
NEDDPAFLHP SKPIGPAFNE AEAARLPYPT VRTDKGYRRV VASPKPVTIV EKREIKRLID
LGFIVISCGG GGIPVIRDSR TFHGVDAVID KDLASARLAG EIGVDIFLIA TDVEGVALHY
EQETRRSWLR SVSVGDAGRF LEEGHFPPGS MGPKVEACIE FMKHGGTRAV IASIERIEAA
VQGAAGTEFA P